Protein

View in Explore
Genbank accession
XPZ16561.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MGLEVATYINQLVPTNPTGSDLKSFGDDHLRLIKSAIKNTFPNISQAVTATAAQLNAVADTTQYVKPGMVIMWAGSLAQIPAGWKLCNGVGTTSNGIPVPNLIGAFPWGIDGSSQAVGTRGGSANIVWDGFTEGTALTLAQIPSHTHTWRSRGATTLTGSAGDSGALTGGSGNAANTNLETGPAGQGQTHNHAVKINMPLGNIPPFCSVFFIIKN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22126,67610 Da
isoelectric point:7,84627
aromaticity:0,06512
hydropathy:-0,01163

Domains

Domains [InterPro]
DC_2164
STR
3–215
DC_2164
SSF88874
STR
60–214
SSF88874
XPZ16561.1
1 215
Architecture
STR
STR 3-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Clew-6
[NCBI] 		3388599 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPZ16561.1 [NCBI]
Genbank nucleotide accession
PQ790660 [NCBI]
CDS location
range 34923 -> 35570
strand -
CDS
ATGGGTCTTGAGGTCGCAACTTACATTAACCAGTTGGTGCCTACGAACCCTACCGGCTCTGATCTGAAATCCTTTGGGGATGACCACCTGCGTCTCATTAAGAGTGCTATTAAGAACACCTTCCCCAATATTTCTCAGGCTGTCACTGCAACGGCAGCCCAGCTAAACGCAGTCGCTGATACAACCCAGTATGTTAAACCTGGGATGGTTATCATGTGGGCTGGGTCACTAGCTCAGATCCCAGCAGGTTGGAAGTTGTGCAATGGGGTAGGTACTACCTCTAACGGGATTCCCGTCCCTAACCTGATTGGTGCATTCCCTTGGGGTATCGATGGTTCTTCCCAGGCTGTAGGGACTAGAGGCGGTAGCGCTAACATCGTATGGGATGGGTTCACTGAAGGGACTGCCCTTACCCTAGCCCAAATCCCATCGCACACCCACACTTGGAGATCCCGAGGGGCTACTACCCTCACCGGTTCTGCGGGTGACTCTGGTGCTCTGACGGGTGGCTCTGGTAACGCAGCCAATACCAACCTTGAGACTGGCCCTGCTGGTCAAGGTCAGACTCACAACCATGCAGTAAAGATCAACATGCCGTTGGGTAATATCCCACCGTTCTGTTCTGTGTTCTTCATCATTAAGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
72c0939d706431986ddef320f9942f5ec072382a0d0d8b6d0f1b5ced75b1d1bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7426
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A biofilm-tropic Pseudomonas aeruginosa bacteriophage uses the exopolysaccharide Psl as receptor Walton,B., Abbondante,S., Marshall,M.E., Dobruchowska,J., Alvi,A., Gallagher,L.A., Vallikat,N., Zhang,Z., Wozniak,D.J., Yu,E.W., Boons,G.-J., Pearlman,E. and Rietsch,A. 2025 — GenBank