Protein

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UniProt accession
A0A8S5PWI7 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MSRVRHAVEWLKRDKLLKALSVAMIFSLTFSGYTLFKSLTLQPGQSVTISGGAKVEKPVTSITNAQVDKNGNLVVYYSDGEARNVGSVIGTSGKDGADGRAPTATEIAVAVKAYCITNKCSESPTSAQVAAAVASYCASGNCKGSDGKNASDEQVAAAVARYCANGKCKGETGATGATGATGAAGLSGLNGANGADGQSPVLACADVKDNSGNQTSWIAWKYPSEQNSAYRRLYKIDHQPNCITI
Physico‐chemical
properties
protein length:245 AA
molecular weight: 25272,02830 Da
isoelectric point:8,84714
aromaticity:0,06122
hydropathy:-0,21796

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctlgF9
[NCBI] 		2825649 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE10660.1 [NCBI]
Genbank nucleotide accession
BK015517 [NCBI]
CDS location
range 7411 -> 8148
strand -
CDS
ATGAGCAGGGTACGACACGCCGTAGAGTGGTTGAAAAGGGACAAGCTGCTTAAAGCGCTATCGGTGGCTATGATATTTAGCCTGACCTTTAGCGGCTACACTCTCTTTAAGAGCCTAACCCTCCAGCCTGGCCAATCTGTCACCATTAGTGGCGGTGCAAAGGTAGAAAAGCCAGTAACTAGCATCACTAATGCCCAAGTAGACAAAAACGGCAATCTAGTCGTCTACTACTCTGACGGAGAAGCGCGCAATGTCGGTTCAGTTATTGGAACGTCCGGTAAAGATGGGGCAGACGGTAGAGCACCAACCGCTACAGAAATTGCTGTGGCGGTTAAAGCCTACTGTATTACCAATAAGTGTTCAGAGTCGCCCACTAGCGCACAAGTAGCCGCTGCTGTAGCATCATACTGTGCAAGCGGGAACTGTAAGGGGAGTGACGGTAAAAACGCATCTGACGAGCAGGTAGCCGCAGCCGTGGCGCGATACTGTGCGAACGGTAAGTGTAAAGGTGAGACTGGAGCTACCGGAGCGACAGGAGCGACTGGCGCAGCAGGCTTGAGCGGATTAAACGGGGCGAACGGCGCAGACGGCCAAAGCCCCGTGTTAGCTTGTGCAGACGTTAAAGATAACTCTGGCAATCAAACATCATGGATTGCCTGGAAATATCCGAGCGAGCAGAACAGCGCGTACAGGCGTTTATACAAGATTGACCACCAACCTAATTGCATAACAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cab79441bd669b6d18b29082681c8d46912efa7740a6d5e992c1e8196a51bee8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7187
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50