Protein

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Genbank accession
CAB5170570.1 [GenBank]
Protein name
Phage tail collar domain containing protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,84
Protein sequence
MNDASGNVAIGGTSLTVNSVPVALAPSGTIIQSAASSAPTGYLACDGTTYLKSSYSALAAAIGTAPTLQGSYVAANYAAAGYYVNSNLIIGGSYSSNGGVSFSAMGTNFTPNNETYPTGNAIWTGTNYVTSLGAANGIAYRTTLGGAGTIVTTNINYVVKGLAWNGSNLAVASGTSATISYSTNGTSWTAGASLGTGGSAVDAAYGNSTFVIVGSNTASGGVIWTTTNGTAVTARTLPSGFGGAGVPVYTVTYYNSLFIAVDAAGAIASSPDGTTWTLKAPAYTIVPLGGSVNNLGPYFTQIMQQVTRVMYCSGLYFCGPFYSSDLVTWRLIPPFQLTANNTSAYYPVSGYPITDGTKVYYTGFAINYNGSASVYTPSSAITPYNYTTSTQFVVPNLVSLQAPNQYFYIKT
Physico‐chemical
properties
protein length:411 AA
molecular weight: 42042,16310 Da
isoelectric point:7,53466
aromaticity:0,12409
hydropathy:0,19148

Domains

Domains [InterPro]
IPR037053
ATT
18–72
IPR037053 DC_1686
IPR037053
ATT
18–75
IPR037053
SSF88874
STR
22–69
SSF88874
IPR011083
ATT
28–65
IPR011083
CAB5170570.1
1 411
Architecture
ATT
STR
ATT 18-75 | STR 216-407 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB5170570.1
1 411
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,3881
Central domain 11 400 391 0,9749
C-terminal 401 411 10 0,5518
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-400
C-terminal
401-411

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB5170570.1 [NCBI]
Genbank nucleotide accession
LR798203 [NCBI]
CDS location
range 17171 -> 18406
strand -
CDS
GTGAATGACGCCAGCGGAAACGTGGCTATTGGTGGAACATCGCTTACCGTAAATAGCGTTCCTGTCGCGCTTGCTCCTTCTGGCACAATTATTCAGTCAGCGGCATCTTCCGCACCAACTGGCTATTTAGCATGTGATGGAACGACATATTTAAAATCTTCTTACTCGGCTCTAGCGGCAGCTATCGGAACTGCCCCAACCTTGCAGGGGTCATACGTTGCGGCAAATTACGCAGCCGCAGGCTATTATGTAAATAGCAACTTAATTATTGGTGGGTCGTATTCATCAAATGGTGGTGTGTCGTTTTCAGCAATGGGAACGAACTTTACCCCCAACAATGAAACATATCCTACCGGGAACGCCATTTGGACGGGAACAAATTATGTTACGTCTCTTGGAGCCGCCAACGGCATTGCATATAGAACAACTTTGGGTGGCGCAGGAACTATTGTTACCACAAATATCAACTATGTTGTAAAGGGACTTGCCTGGAATGGAAGCAACCTTGCTGTTGCTTCTGGTACCAGTGCAACTATTTCATATAGCACAAACGGAACTTCTTGGACGGCTGGTGCTAGCTTGGGAACCGGCGGAAGTGCGGTTGACGCCGCTTATGGAAATAGCACTTTTGTTATTGTCGGCTCAAATACAGCAAGCGGCGGCGTAATTTGGACAACGACAAACGGAACTGCTGTAACAGCAAGGACGTTGCCGTCCGGGTTTGGTGGAGCAGGCGTTCCTGTATACACGGTGACGTATTATAACAGCTTATTCATTGCGGTAGATGCGGCTGGGGCTATCGCAAGTAGCCCTGATGGCACTACTTGGACGTTAAAGGCACCCGCGTATACAATTGTTCCGTTGGGCGGGTCAGTGAATAATCTTGGACCTTACTTCACTCAAATTATGCAACAAGTTACCCGAGTTATGTATTGCTCTGGGTTGTACTTTTGCGGTCCCTTTTATAGTTCTGATCTTGTAACATGGAGGCTTATCCCTCCATTTCAGCTTACTGCAAATAATACTTCGGCATATTATCCAGTAAGCGGATATCCGATCACAGACGGAACAAAGGTTTATTATACGGGATTTGCCATTAATTATAATGGAAGTGCATCCGTATATACGCCTTCATCAGCAATTACCCCGTATAATTACACGACATCAACACAGTTCGTGGTCCCAAATCTTGTAAGCCTTCAGGCTCCCAATCAATACTTCTACATCAAGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b1425cbd610064ef6cfc0b488429d9ec28791aabc51abb0850cf769eab9da3f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7146
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50