Protein

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Genbank accession
XPQ57408.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAIARKFGVKQNEVVYFAVGVDLGGYKVIYDKETQRAYSLPADIAPGTTAISLSAAAVLVHSAGSVDLGELAVSREEYVTLPGTFDTGATLKAKNELLVYLDTKYRWRGAFPKTIPANSTPASSGGVSSSAWSLVTDNTLREELAATGGSLLIADFSSPDAYSYIAEATSFAQLRTITPRAEGVKIKLRGYHNGSELGGGVFIGHLTAKADNGITVASNGGAYHWVRENVKNIDVFMAGAYGDGVTSDWTAIQSAINYVNTLALVAGAVTGEVILPFGYTYCVDETLYLDIPIKFNCQGNLYWAAKSGYCIRVGRGVGWNVQYDIYIRNAWADSTLSFPTTWVSGGTGLMLLTSITFSTIKIDTATGFTEAVLYMWADGALGYKTVVQHNTFNLGQIVNSGRGIRMSSLDAASSSAQANRFYIQNIYQNYDNIVLEGTATNSNTFWINAMDNCRNVGIDLYGHLNHFYIGFAGAPGTALRENSSYGNTVEFGNSVPTDLVINFGATAANTIRCANPGPSYLPASQPVVSGTNYQNTYGIPLSIYGNLTFSTAGTVQVYYGKNSGAMSVVQTISGSAGTTIPVHLTIPPGYYYKLFTTSGAVNLGTLSLNAAL
Physico‐chemical
properties
protein length:631 AA
molecular weight: 67199,67720 Da
isoelectric point:6,09299
aromaticity:0,11094
hydropathy:0,03550

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
DC_1953
STR
1–630
DC_1953
IPR040775
RBD
91–156
IPR040775
XPQ57408.1
1 631
Architecture
ATT
STR
ATT 1-165 | STR 166-630 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPQ57408.1
1 631
Domain Start End Length (AA) Confidence
N-terminal 1 265 265 0,9930
Central domain 266 534 270 0,9907
C-terminal 535 631 96 0,9834
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-265
Central
266-534
C-terminal
535-631

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage CAU_YEP3
[NCBI] 		3398731 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPQ57408.1 [NCBI]
Genbank nucleotide accession
PQ863687 [NCBI]
CDS location
range 64275 -> 66170
strand -
CDS
ATGAACGAGATGTTCTCACAAGGCGGCAAAGGCTCTACTGGTATTCTTACCAATAAGCAAGCTATTGCCCGTAAGTTTGGTGTTAAACAGAATGAAGTAGTCTACTTTGCTGTTGGAGTAGACTTAGGTGGATATAAAGTTATCTACGACAAGGAGACGCAAAGAGCTTACTCACTACCTGCTGATATTGCCCCAGGTACTACTGCTATTAGTCTTAGTGCTGCTGCTGTACTTGTACATTCAGCTGGTTCTGTAGATCTTGGGGAATTAGCCGTATCCCGGGAAGAATACGTTACATTGCCTGGAACGTTTGATACAGGTGCTACCCTTAAAGCTAAAAATGAGCTACTCGTATATCTGGATACTAAATATCGTTGGAGGGGCGCATTTCCTAAAACAATTCCAGCTAACTCAACACCGGCATCCTCGGGCGGAGTGTCAAGTTCGGCCTGGTCGCTGGTTACAGATAATACCCTGCGCGAAGAGCTAGCAGCAACAGGAGGCTCGCTTCTCATAGCTGACTTCTCATCTCCAGACGCATATAGCTATATCGCGGAAGCGACCAGCTTTGCCCAATTGCGCACAATTACCCCACGCGCAGAAGGGGTTAAGATAAAACTTCGTGGGTATCACAACGGAAGTGAGCTTGGTGGCGGCGTGTTTATCGGCCACCTGACAGCTAAAGCCGACAACGGAATTACAGTTGCCTCCAATGGTGGTGCATATCATTGGGTTCGCGAAAATGTTAAAAACATTGACGTGTTCATGGCTGGTGCTTATGGTGATGGCGTTACCAGTGATTGGACAGCTATCCAGTCCGCAATAAACTATGTGAATACTTTAGCTTTAGTTGCTGGAGCGGTAACTGGAGAGGTTATTCTCCCATTTGGTTATACATATTGCGTCGATGAGACACTGTATCTTGATATTCCTATTAAATTTAATTGTCAGGGCAATCTGTATTGGGCGGCCAAATCTGGATATTGTATTCGAGTAGGGCGCGGCGTCGGCTGGAATGTTCAATATGATATTTATATCAGGAATGCTTGGGCAGATTCTACGTTATCTTTCCCAACCACTTGGGTTAGTGGTGGTACTGGCCTTATGTTGTTAACATCAATCACATTCAGCACTATTAAAATAGACACCGCCACTGGGTTTACTGAGGCAGTCCTATATATGTGGGCTGATGGTGCATTGGGGTATAAGACAGTTGTCCAACACAATACATTTAACCTTGGGCAAATTGTCAACTCTGGTAGAGGAATTAGAATGTCATCACTTGACGCCGCATCAAGTTCTGCACAGGCTAACAGATTTTATATACAGAATATTTACCAGAATTACGATAATATCGTACTGGAAGGTACTGCAACGAATAGTAATACGTTCTGGATTAATGCAATGGACAACTGTAGAAATGTTGGCATTGATTTATATGGGCACCTTAACCATTTCTATATTGGTTTTGCTGGTGCTCCAGGCACGGCTTTACGTGAAAACAGTTCTTATGGGAATACAGTTGAATTTGGCAACAGTGTGCCGACCGACTTGGTTATCAATTTCGGAGCTACGGCCGCGAACACTATTCGCTGCGCCAATCCCGGGCCGTCCTATTTGCCAGCGTCTCAGCCTGTTGTGAGCGGTACTAATTACCAGAATACATACGGGATACCATTATCTATTTACGGTAATTTGACCTTCTCAACCGCCGGGACAGTACAGGTTTATTACGGTAAAAACTCAGGTGCCATGAGTGTGGTGCAAACTATTAGCGGGTCCGCTGGCACCACTATCCCCGTACACTTAACGATTCCACCGGGATATTATTATAAACTTTTCACTACGTCAGGCGCGGTTAACTTAGGAACGTTATCGCTTAATGCGGCATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8d9118f150ec5d03d44869cffcbc97a6e781292e65b02b42ed05d94847ea1492
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8215
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50