Protein

View in Explore
Genbank accession
WOZ54172.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
Protein sequence
MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKAADYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPDANASTIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELDYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVEGELELTKQHWDLIKDAPAVYQLKPVAGAYMERYQLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTATRAVLHRYSVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQIYRRV
Physico‐chemical
properties
protein length:826 AA
molecular weight: 92053,90280 Da
isoelectric point:6,08560
aromaticity:0,10896
hydropathy:-0,32554

Domains

Domains [InterPro]
IPR058003
TTP
1–816
IPR058003
DC_0058
STR
1–826
DC_0058
WOZ54172.1
1 826
Architecture
STR
STR 1-826
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WOZ54172.1
1 826
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9925
Central domain 140 338 200 0,2404
C-terminal 339 826 487 0,3282
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-338
C-terminal
339-826

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaPhi_Mx1
[NCBI] 		3079664 Uroviricota > Caudoviricetes >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WOZ54172.1 [NCBI]
Genbank nucleotide accession
OR594342 [NCBI]
CDS location
range 12100 -> 14580
strand -
CDS
ATGAGCTACAAGCAATCCGCGTATCCCAATCTGCTGATGGGCGTGAGCCAACAGGTGCCCTTCGAGCGCCTGCCCGGCCAGCTCAGCGAGCAGATCAACATGGTATCCGACCCCGTGTCGGGACTGCGGCGGCGCAGTGGTATCGAGCTGATGGCTCACCTGCTGCATACCGACCAGCCCTGGCCGAGGCCGTTCCTCTACCACACGAACCTAGGTGGCCGCAGCATTGCGATGCTGGTGGCCCAACACCGTGGCGAGCTGTACCTGTTCGACGAGCGGGATGGACGCCTGCTGATGGGCCAGCCCCTGGTGCATGACTACCTCAAGGCCGCCGACTATCGTCAGCTACGGGCCGCCACGGTGGCCGATGACCTGTTCATCGCCAACCTGAGCGTGAAGCCCGAGGCCGACCGCACCGACATCAAGGGCGTAGACCCCAACAAGGCCGGCTGGCTGTACATAAAGGCAGGCCAGTATTCGAAGGCATTCTCCATGACCATCAAGGTCAAGGACAACGCCACCGGCACCACCTACAGCCACACGGCCACTTACGTGACGCCGGACAACGCCAGCACGAACCCCAACCTCGCTGAGGCGCCATTCCAAACGAGCGTAGGCTACATCGCGTGGCAGCTCTACGGTAAGTTCTTCGGTGCGCCGGAGTACACCCTGCCCAACTCGACGAAGAAGTACCCGAAGGTGGACCCGGACGCCAACGCGTCAACCATAGCCGGCTACCTCAACCAACGGGGAGTGCAGGACGGGTACATCGCATTCCGGGGCGACGCCGACATCCACGTCGAAGTGTCCACGGATATGGGCAACAACTACGGCATAGCGTCGGGCGGTATGAGCCTCAACGCTACGGCAGACCTGCCGGCCCTGCTGCCCGGTGCGGGTACTCCTGGCGTCGGCGTGCAGTTCATGGACGGCGCAGTCATGGCCACTGGCTCCACCAAGGCGCCCGTGTACTTCGAGTGGGATTCCGCTAACCGCCGCTGGGCGGAGCGAGCCGCCTACGGCACCGATTGGGTCCTGAAGAAGATGCCCTTGGCCCTACGCTGGGACGAGGCCACTGACACCTACAGCTTGAACGAGCTGGACTACGACCGGCGTGGCTCCGGCGACGAGGACACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACGACCTTCCAGGGTCGCCTCGTTCTCCTGTCACAGGAGTACGTCTGCATGTCGGCCAGCAACAACCCACACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGATGATCCTATCGAGATCGCCGCTCAGGGTAGCTTGACCGAGCCGTACGAGCATGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTATCAGGCCGTGGTCCCCGGCGGTGGTATCGTGACTCCCCGGACGGCAGTCATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGCCGCAGTGTGTACTTCGCCGCTGAGCGTGCCCTGGGTTTCATGGGCCTTCACGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTATGTCGCCGAGGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTCGGCACCAGCACGGCGGACGAGATGATTTGCCATCAGTACCTCTGGCAGGGTAACGAGAAAGTCCAGAACGCCTTCCACCGCTGGACGCTGCGGCATCAGATCATCGGCGCGTACTTCACCGGCGACAACCTGATGGTCCTGATCCAGAAGGGCCAGGAGATCGCCCTGGGTCGGATGCACCTGAACAGCCTGCCAGCCCGCGAGGGCCTGCAATATCCGAAGTACGACTATTGGCGCCGTATCGAGGCAACCGTCGAGGGCGAGCTGGAGCTGACGAAGCAGCACTGGGACCTGATCAAGGATGCCCCTGCCGTGTACCAGCTCAAGCCAGTGGCCGGGGCCTACATGGAACGCTACCAGCTCGGCGTGAAGCGCGAGACGAACACGAAGGTATTCCTCGACGTGCCCGAGGCTGTGGTCGGTGCCGTGTACGTGGTAGGCTGTGAGTTCTGGTCCAAGGTGGAGTTCACTCCGCCGGTGCTCCGGGACCACAATGGGCTGCCCATGACCGCGACCCGAGCAGTGCTCCACCGATACAGCGTGAACTTCGGATGGACTGGCGAGTTCCTGTGGCGCATCAGCGATACGGCCCGGCCTAACCAGCCGTGGTACGACACGACGCCTCTGCGGCTGTTCAGTCGGCAACTCAACGCCGGCGAGCCGCTGGTGGATAGCGCCGTGGTGCCGCTGCCCGCCAGGGTGGACATGGCCACGTCCAAGTTCGAGTTGAGCTGTCACAGTCCGTACGACATGAACGTCCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAATCTACCGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
465fd8d66a8a6728b5b76aa0630c223faaa3a6d85764d9b74af6343a9121483b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Phikmvvirus bacteriophage (vB_PaePhi_Mx1) has lytic activity against Pseudomonas aeruginosa multidrug resistant sequence type epidemiological high risk clinical strains Rodea,G.E. Sr. and Molina,J. 2024 — GenBank