Protein

View in Explore
Genbank accession
QZI85674.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSVIKGTANGYYDFLNQLQAILCDAGHAWNKSYTGTGNGRITGMNEESGGYVGGPESIAETFTITATSPTQFSVEGSVSGVIGTTGVNVAFNHPKLKFRIVPGNVAFVAGDKFVLNTTPKWQLLRRIGTRGSAFRPSDMVNSQNLWSTDQEYASKPAAQLPAHAGIQLIKEEVVGQFVIRAYNGSSNFTPKSFDLQYSDDGVNYTTAQSWANVVISSNEAKAFDVTEAVTPHLYWRLRFNTTVVENVEVRVAGLEFRRSAADNFTISGGSEVLFKAPGLGGLESIIIGCELYESVSNAVYNLNWYAPRNFDDKKRLRNMLPASGFVGTPLTNQAFNFWVFVNGQRVIIACRIGSVYIGGYFGFGSPYEIQTNHQYPMILGGCTDEEATRFDTTNAENRIYCNPGRYTLRAFYPASGWVRHANLREVGNNVASGSGVEDGKVFPAAMVGGGDVRYLYRDNVDGSLPMFPCVIGGANPRHMWGEFDGVYWTTGFNNLPEAIITREGFDHLVLQDMFRTTYQDYYAVRMD
Physico‐chemical
properties
protein length:527 AA
molecular weight: 58045,35900 Da
isoelectric point:5,84017
aromaticity:0,12524
hydropathy:-0,21328

Domains

Domains [InterPro]
DC_1928
ATT
1–134
DC_1928 G3DSA:2.60.120.260
G3DSA:2.60.120.260
STR
150–260
G3DSA:2.60.120.260
IPR008979
STR
154–216
IPR008979 DC_0072
QZI85674.1
1 527
Architecture
ATT
STR
ATT 1-134 | STR 139-527
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI85674.1
1 527
Domain Start End Length (AA) Confidence
N-terminal 1 22 22 0,8610
Central domain 23 225 204 0,5898
C-terminal 226 527 301 0,9548
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-22
Central
23-225
C-terminal
226-527

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Summit
[NCBI] 		2859661 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI85674.1 [NCBI]
Genbank nucleotide accession
MZ326862.1 [NCBI]
CDS location
range 14927 -> 16510
strand +
CDS
ATGAGTGTTATCAAGGGAACGGCAAACGGCTACTACGACTTCCTGAATCAGTTGCAGGCCATCCTGTGCGACGCGGGACATGCGTGGAACAAGTCGTACACCGGTACTGGCAATGGCCGTATCACCGGCATGAATGAAGAGTCTGGTGGCTACGTTGGAGGCCCGGAATCTATCGCGGAGACCTTCACGATCACCGCCACCAGCCCCACGCAATTCTCGGTGGAAGGTTCGGTGTCGGGAGTGATCGGCACCACGGGAGTCAATGTCGCCTTCAACCATCCGAAGCTGAAGTTCCGGATTGTGCCGGGCAACGTGGCCTTCGTGGCAGGCGACAAGTTCGTTCTGAACACGACCCCGAAGTGGCAGCTGCTGCGACGTATCGGTACGCGCGGCTCGGCTTTCCGTCCATCGGACATGGTGAACTCGCAGAATCTGTGGTCCACGGATCAGGAGTATGCGAGCAAGCCCGCTGCCCAGCTTCCGGCCCATGCTGGTATCCAGCTGATCAAGGAAGAAGTGGTGGGTCAGTTCGTGATCCGCGCCTACAACGGAAGCTCCAACTTCACCCCGAAGTCTTTCGACCTTCAGTATTCGGATGATGGCGTGAACTACACGACGGCCCAAAGTTGGGCGAACGTGGTGATTTCCTCGAACGAAGCGAAGGCTTTTGACGTGACGGAGGCGGTGACGCCGCATTTGTACTGGAGGTTGCGGTTCAATACCACGGTGGTGGAGAACGTAGAAGTTCGTGTGGCGGGGCTGGAGTTCCGCCGTAGTGCGGCTGACAACTTCACGATTTCGGGCGGCTCGGAAGTCCTGTTCAAGGCACCGGGTCTGGGCGGCTTGGAGTCGATCATCATCGGCTGCGAACTGTATGAGAGCGTCTCGAACGCGGTGTATAACCTGAACTGGTATGCACCTCGCAACTTCGATGACAAGAAGCGGCTGCGGAACATGCTCCCCGCCTCGGGTTTTGTCGGCACCCCACTGACGAATCAGGCGTTCAACTTCTGGGTGTTCGTGAACGGTCAGCGGGTGATCATCGCGTGCCGTATCGGCTCGGTGTATATCGGAGGCTACTTCGGCTTCGGCAGTCCGTATGAAATCCAGACCAACCACCAGTATCCGATGATTCTGGGTGGCTGCACGGACGAAGAAGCGACTCGATTCGACACCACGAACGCGGAGAATCGCATCTACTGCAACCCGGGGCGCTACACCCTGCGAGCGTTCTACCCGGCGTCTGGTTGGGTGCGCCATGCGAACCTGCGGGAAGTCGGCAACAACGTTGCCTCGGGGTCTGGTGTGGAGGATGGAAAGGTCTTCCCGGCTGCGATGGTGGGTGGCGGAGACGTGCGCTACCTGTACCGCGACAACGTGGATGGCAGCCTGCCGATGTTCCCGTGCGTAATCGGAGGGGCCAACCCCCGCCACATGTGGGGAGAGTTCGACGGGGTGTACTGGACCACTGGATTTAACAACCTCCCGGAGGCGATAATCACTCGGGAAGGCTTCGATCATCTGGTGCTGCAAGACATGTTCCGCACGACCTACCAAGACTACTACGCAGTGAGGATGGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
316e9cbd8b72f06a32743fa9cd5058a0d54e92ad757ec39bb8d3d7f579cd3404
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6234
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Stenotrophomonas maltophilia phage Summit Bishop,A., Zhang,X.-H., Clark,J., Burrowes,B., Liu,M. and Gill,J. 2022-04-21 — GenBank