Protein

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Genbank accession
QIW87916.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSKFLAAAETGPGLNSVYDLRDEFSGAFVESDRKFCSNTKVIEFQIESIFENSTKYGMYTEIFGGDPIPEILEFDETAVEGQTLTEIGVAKGWELFLTNTDGNRVALKSSTTLARGATPLNKKTHPDVEFVLKTRSDKTFREKSFSAIVRSETAWSPLRKILEENGTANVFINGDSTAYPIDGQFAILFEKVGEYHDATIVIHQWAEWNINTANGPMEYKAPVIIREGNRGTVHVWLAAVPGGMAGYMFAGIRSKALDVPKPDLIIMCQGHNMQSFETPSGPSRLVSGKSAFLGPIGMTCLKWPGVPQIITTQNPRRSDTGYTKVREAILEICASLTDLYLEDTYLVFESAGKPVSWYTDNVHPNKLGSTKIAEYLFESYRRSSPKDGFETEAWPLKPVTGNLFIDPSFNNWTAAVPANWNAQAPATAVKDVDNKWNASFPYSMSVLPNGNQNAGVIRYIRTTELTPMLGKRVTAVVLYETVPEQRNATVSFVVKSGGGSKTLVGASLQFGGAGTLKSAGKMMAVFHDVLVDADIDPNSFTTYFSIRPAFGTSAPTSAAPIRIQKIIIVEGDKPRIGL
Physico‐chemical
properties
protein length:578 AA
molecular weight: 63319,13650 Da
isoelectric point:5,94487
aromaticity:0,10035
hydropathy:-0,18737

Domains

Domains [InterPro]
IPR036514
STR
155–379
IPR036514 DC_0332
SSF52266
STR
231–378
SSF52266
QIW87916.1
1 578
Architecture
STR
STR
STR 155-379 | STR 389-577 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW87916.1
1 578
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9091
Central domain 147 353 208 0,5707
C-terminal 354 578 224 0,8248
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-353
C-terminal
354-578

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage OLIVR6
[NCBI] 		2723774 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhizogenic Agrobacterium biovar 1
[NCBI] 		1183400 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Rhizobiaceae > Agrobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW87916.1 [NCBI]
Genbank nucleotide accession
MT234343.1 [NCBI]
CDS location
range 4828 -> 6564
strand +
CDS
ATGAGTAAGTTCCTCGCTGCAGCAGAGACCGGTCCTGGGCTAAATTCCGTTTACGATTTGAGAGACGAATTTAGCGGAGCTTTCGTAGAATCCGATAGGAAATTCTGCAGCAACACGAAAGTCATCGAATTCCAAATCGAAAGCATTTTCGAAAACTCCACGAAATACGGGATGTACACCGAAATCTTCGGTGGCGATCCTATTCCAGAAATTCTTGAATTCGACGAAACTGCCGTAGAAGGCCAAACACTTACCGAAATCGGCGTAGCTAAAGGGTGGGAGCTTTTCCTAACGAACACGGATGGTAATAGAGTAGCTCTCAAATCTTCTACTACCCTGGCCCGTGGCGCTACCCCTCTAAACAAAAAGACACATCCTGATGTAGAGTTTGTTCTTAAGACGAGAAGCGATAAGACGTTCCGAGAGAAATCTTTTAGCGCTATCGTCAGATCAGAAACTGCTTGGTCTCCTCTGAGGAAAATCCTAGAGGAAAATGGCACGGCGAACGTCTTCATTAATGGAGACAGCACGGCTTATCCTATCGATGGTCAATTCGCTATCCTCTTTGAGAAAGTTGGAGAATACCACGACGCGACTATCGTAATCCATCAATGGGCAGAATGGAATATCAATACCGCCAATGGCCCGATGGAATACAAGGCTCCGGTGATTATTCGCGAAGGAAATAGAGGCACTGTCCACGTGTGGCTTGCTGCCGTTCCTGGAGGCATGGCCGGATATATGTTTGCAGGAATCAGATCGAAGGCTCTCGACGTGCCTAAGCCTGATTTGATCATCATGTGTCAAGGTCATAACATGCAGAGCTTCGAAACTCCTTCCGGTCCTTCTAGACTCGTCTCAGGTAAATCTGCATTCTTAGGTCCGATCGGGATGACTTGCTTGAAATGGCCTGGCGTGCCGCAGATTATTACGACTCAGAACCCGAGAAGGTCAGACACAGGTTATACGAAGGTGAGAGAAGCTATCCTAGAGATTTGCGCATCTCTGACGGACCTTTATCTCGAAGACACGTATTTAGTCTTCGAAAGCGCTGGAAAACCTGTCTCCTGGTATACGGACAACGTTCATCCGAACAAACTCGGAAGCACGAAAATAGCCGAATACCTTTTCGAATCTTATAGAAGGTCTTCTCCGAAGGATGGATTCGAAACGGAAGCATGGCCGCTAAAACCTGTAACAGGAAATCTTTTCATCGATCCTTCGTTCAACAATTGGACTGCAGCCGTTCCTGCTAATTGGAACGCTCAGGCTCCTGCTACAGCTGTGAAAGACGTTGACAATAAATGGAATGCGAGTTTCCCTTATTCCATGTCCGTTCTGCCAAATGGCAACCAAAATGCAGGCGTTATTCGGTACATCAGAACTACTGAATTAACTCCTATGCTAGGGAAAAGAGTCACGGCTGTAGTCCTCTACGAGACGGTTCCTGAACAAAGGAATGCTACAGTTTCTTTCGTTGTCAAATCCGGTGGAGGTTCGAAGACTCTTGTAGGAGCTTCTCTTCAGTTCGGCGGCGCAGGAACTCTGAAATCTGCAGGTAAGATGATGGCTGTTTTCCACGACGTTTTGGTCGACGCTGATATCGACCCGAACTCCTTTACCACTTATTTCTCCATTCGTCCAGCGTTTGGAACAAGTGCACCGACGTCAGCTGCACCGATCCGAATTCAGAAAATCATCATCGTAGAAGGCGATAAACCGAGAATCGGACTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
911344bd30975b9b832736a1a11656addc31df819b295379ad7f531892618f4b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6916
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50