Protein

View in Explore
Genbank accession
WVQ00666.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MSGNLRLYGATSGYSQISAPDVAGDQIFVVPSLGGEVIVSGNNQSLDLGTGDLSSATVTTTGNTAIGGDLSADRGTFSTRVRAVSGNSYAEISHADGLTMVDSNVTKANITLDGSATFARFVSSPAINCEPANRYATNTASFKQPADATNADVVLRLQHEGANDGYLLLGGGSGFTTAANATVGIKADGSATFGGGNTTLDANGDVNFGGKILTPGMSSTASAGGALKIIGNEIFRDSSARGTKENIVSLEESDSVAVTKGLRPVNYIPKGEPDGHLQIGFIAEEVLAVCPPAAITENGEAIGVAYDRLTAICISALQAALTRIEALEAEVQALKDN
Physico‐chemical
properties
protein length:337 AA
molecular weight: 34240,49000 Da
isoelectric point:4,54265
aromaticity:0,05045
hydropathy:-0,00979

Domains

Domains [InterPro]
DC_1985
RBD
79–337
DC_1985
IPR030392
CHP
239–331
IPR030392
IPR030392
CHP
243–292
IPR030392 Coil
WVQ00666.1
1 337
Architecture
RBD
RBD 79-337
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVQ00666.1
1 337
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0136
Central domain 11 209 200 0,1937
C-terminal 210 337 127 0,9849
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-337

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage MC09
[NCBI] 		3117466 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVQ00666.1 [NCBI]
Genbank nucleotide accession
PP110486.1 [NCBI]
CDS location
range 14262 -> 15275
strand +
CDS
ATGAGCGGAAACCTACGACTTTACGGTGCCACCAGTGGCTACAGTCAAATCTCTGCACCTGATGTCGCAGGTGACCAAATCTTTGTGGTACCCAGTCTGGGTGGTGAAGTTATCGTTAGTGGTAACAACCAGTCATTGGACCTCGGTACAGGTGACCTAAGTTCCGCCACCGTCACGACCACTGGCAATACAGCCATCGGTGGCGACCTGAGCGCTGACAGGGGAACATTTAGCACTCGTGTTCGTGCAGTTAGCGGCAATTCATATGCTGAAATTAGTCACGCAGATGGATTGACGATGGTCGATTCAAACGTGACTAAAGCTAATATCACTCTTGACGGTAGTGCTACGTTTGCCAGGTTTGTCTCTTCTCCCGCTATAAACTGTGAACCTGCTAACCGCTATGCAACAAATACTGCATCATTTAAGCAACCAGCTGATGCGACAAACGCTGATGTTGTCTTAAGGCTTCAGCACGAAGGTGCTAACGACGGATACTTGCTTTTAGGCGGAGGCAGCGGATTTACAACTGCAGCAAATGCCACTGTTGGCATTAAAGCGGATGGCAGCGCCACGTTTGGCGGCGGGAACACCACGCTGGATGCGAATGGTGATGTCAACTTTGGTGGCAAAATCCTAACCCCAGGAATGTCTTCAACCGCTTCCGCTGGTGGGGCGTTGAAAATCATCGGGAATGAGATCTTCCGCGACTCATCCGCTAGGGGCACCAAAGAGAACATCGTTTCTTTGGAGGAGTCCGACTCGGTGGCGGTAACCAAGGGGCTTCGTCCTGTTAATTACATACCAAAAGGCGAGCCTGACGGGCATCTTCAAATTGGCTTTATTGCGGAAGAAGTTCTGGCAGTGTGCCCGCCTGCCGCTATTACCGAGAATGGCGAAGCAATAGGCGTTGCTTACGACAGGTTGACAGCAATTTGCATCTCAGCCTTGCAAGCCGCACTCACCCGCATCGAAGCCCTTGAGGCTGAAGTCCAAGCCCTTAAAGACAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9fae379d21f0524051e1fbe5af302e2de048cba911445f068dfb5b0bd2560861
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7030
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50