Protein

View in Explore
UniProt accession
A0A0D3QHC0 [UniProt]
Protein name
Tail tubular protein B
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,55
Protein sequence
MALISQSVKNLKGGISQQPDILRFPEQGAEQINAWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSVEQYYVVFTGQGVRVFDLNGKEYTVKGDLSYVKVGNPRDDLRMVTVADYTFIVNRNMVVRADTAPLYSLKENGDCLINVRGGQYGRTLAFTINGVRISYKIHNGVGDGAEQAVQETDAQWLVKKLAGLARAHGSFKDWKFDEGPGFIHVIAPGNSQINSLSTEDGYANQLMNAVMHTSQSFSKLPLEAPNGYTVKIVGDTSKTSDQFYVQYDNVKKVWKEVAGWGVQKGLNGDTMPHALVRQSDGSFQMQALPWSQRTCGDMDTNPTPSIVDQTINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSGTENFISVLSANAPSKIFLYKFLYLNEEIAQQSWSHWELGSNVTVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFPDEPYRLYIDNKMKYVIPTGSYNDDTYTTTIKPVDIYGMKYWLGKFYIVASDGLVSWFDQPRGGWPDGVPVLSMNGNREGETIYIGMAIDFRYVFSKFLIKKTADDGSTATEDIGRLQLRRAWVNYEDSGAFVVEVENTSRLFSYDMAGARLGSNALRSGGLNVGTGQFRFPVAGNAQLNEVRIISDHTTPLNVIGCGWEGNYLRRTSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 88397,55560 Da
isoelectric point:6,12033
aromaticity:0,11195
hydropathy:-0,26239

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
A0A0D3QHC0
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A0D3QHC0
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9967
Central domain 142 346 206 0,1229
C-terminal 347 795 448 0,2011
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-346
C-terminal
347-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage P483
[NCBI] 		1572753 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJF40443.1 [NCBI]
Genbank nucleotide accession
KP090453 [NCBI]
CDS location
range 10869 -> 13256
strand -
CDS
ATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAAGGCGGTATCAGTCAACAGCCAGACATCTTAAGGTTCCCCGAACAGGGTGCCGAACAGATTAACGCTTGGTCGTCTGAGACTGAGGGTCTTCAGAAGCGTCCACCTTTTGTCTTCACTAAGACCATTGGAGACCAGAATGCCCTTGGTGCCAAACCTCTCGTTCACCTCATCAACCGAGATAGTGTCGAACAGTATTACGTAGTGTTTACCGGACAGGGTGTTCGAGTGTTCGACCTCAATGGTAAAGAGTATACTGTGAAGGGTGACTTGTCCTACGTGAAGGTAGGGAATCCACGAGATGACTTAAGGATGGTCACTGTGGCTGACTATACGTTTATCGTAAACCGTAACATGGTGGTACGCGCTGACACTGCCCCTCTGTATAGCCTAAAGGAGAATGGAGACTGTTTGATTAACGTCCGTGGTGGTCAGTATGGGCGTACACTGGCATTCACTATCAACGGTGTACGTATCTCATACAAGATTCACAACGGTGTCGGTGATGGTGCTGAACAGGCTGTACAGGAGACAGACGCACAGTGGCTCGTTAAGAAACTAGCTGGCCTTGCTCGTGCTCACGGTTCCTTTAAGGACTGGAAGTTCGACGAAGGGCCGGGGTTCATCCATGTGATTGCTCCGGGTAACAGCCAGATTAACTCACTGTCCACTGAAGATGGCTACGCCAACCAGTTGATGAACGCAGTGATGCACACCAGCCAGTCATTCAGTAAGTTGCCCCTTGAGGCTCCTAATGGATACACAGTGAAGATTGTAGGTGACACCTCTAAGACTTCCGACCAGTTCTACGTTCAGTACGACAACGTGAAGAAGGTGTGGAAAGAGGTGGCTGGTTGGGGAGTACAGAAGGGACTCAATGGTGACACGATGCCTCATGCTCTTGTGCGTCAGTCTGATGGTTCATTCCAGATGCAAGCCCTTCCGTGGTCACAGCGTACCTGTGGCGACATGGATACTAACCCTACTCCGTCTATTGTTGACCAGACGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTTGCTGGTGAGAACATTGTGATGTCCCGTACATCCAAGTATTTCTCATTGTTCCCTGCGTCCGTGGCTAACCTATCCGACGATGACCCGATTGACGTAGCAGTGTCCCACAACCGTATCTCTATCCTGAAGTACGCTGTACCGTTCTCCGAAGAGTTACTCCTATGGTCAGACCAAGCACAGTTCGTGTTGTCTGCTCAAGGTATCCTCTCTCCGAAGTCCGTAGAGTTGAACCTCACGACCGAGTTCGATGTGTCAGACCGAGCGAGACCTTTTGGTGTTGGACGTGGTGTTTATTTTGCGTCACCTCGTGCTTCCTACACGTCACTGAACCGTTACTATGCGGTACAGGATGTTAGCTCCGTGAAGTCTGCTGAGGATATGAGTGCTCACGTTCCAAGTTACATTCCGAACGGTGTGTTCTCCATTCGTGGCTCCGGTACTGAGAACTTCATCTCCGTGCTCTCTGCGAACGCTCCGAGTAAAATCTTCCTGTACAAATTCCTGTACCTCAACGAAGAGATTGCTCAACAGTCGTGGTCACATTGGGAACTTGGAAGTAACGTAACGGTTCTGGCTTGTGACTCTATCGGGTCCACCATGTACCTTGTGCTGCGCAACCAGTCCCACACTTGGATGTGCCGCGCTCACTTTACGAAGAACAGCATTGACTTCCCTGATGAGCCTTATCGTCTGTACATTGACAACAAGATGAAGTACGTGATTCCTACAGGTTCCTATAATGATGATACCTACACGACCACTATCAAGCCTGTGGACATCTACGGGATGAAGTATTGGTTGGGTAAGTTCTACATCGTGGCCTCTGATGGTTTAGTCTCGTGGTTCGACCAGCCGCGTGGTGGGTGGCCTGATGGTGTTCCTGTCCTGTCTATGAATGGGAACCGAGAAGGTGAGACCATCTACATTGGGATGGCAATTGACTTCCGCTACGTGTTCTCTAAGTTCCTCATCAAGAAGACCGCTGACGATGGGTCTACGGCTACCGAGGACATTGGTCGCTTGCAGCTTCGACGCGCATGGGTTAACTATGAGGACTCTGGCGCATTCGTTGTGGAAGTGGAGAACACCTCTCGACTGTTCAGCTATGACATGGCGGGTGCTCGCTTGGGTTCCAATGCGTTACGCTCTGGTGGACTTAACGTTGGTACAGGTCAGTTCCGCTTCCCGGTTGCTGGCAACGCACAGTTGAATGAGGTCCGTATTATCTCTGACCACACTACACCACTAAACGTGATTGGATGTGGCTGGGAAGGTAACTACCTACGTCGTACTTCTGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c11db325a8ffc96bdbf458df35f4b7a0b4c90a13188ca42c2e773f070134e514
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8961
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50