Protein

View in Explore
Genbank accession
YP_009814228.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSTENAMNYFKTPDNSNDPLAKNYYGNPDNSDGVDYTKITLEDLGFTVDAVKNQLTGMEEDLTDPVTGEPYQDSYYQAFMEQAVAMAEKEFDIVIRPRLDYDRLDFYRGDFDSFMYVRTYERPILHVKQVKMYLNDQTILDYPDRWIKVTNRLGQIELQPSLLAGGFNASMQVPYLSISGYPFGVPPVSQDQFSPQMLGVSYIAGMIPQPEDQHGINRDYYPHPDLIAYCAKYAAIEVLERWGRTVIGAGIAGFDVSIDGISTNVNSTQSAENTASTADIKLMQADMKHMKDTLMEYYGGRNIGFIA
Physico‐chemical
properties
protein length:307 AA
molecular weight: 34687,51770 Da
isoelectric point:4,47109
aromaticity:0,11726
hydropathy:-0,41531

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Iacchus
[NCBI] 		2315483 Uroviricota > Caudoviricetes > Herelleviridae > Harbinvirus iacchus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009814228.1 [NCBI]
Genbank nucleotide accession
NC_048084.1 [NCBI]
CDS location
range 10424 -> 11347
strand +
CDS
ATGAGCACAGAGAATGCCATGAATTATTTCAAGACACCAGATAACTCTAATGACCCCTTAGCTAAAAACTATTATGGTAACCCAGATAACTCTGATGGAGTTGACTATACTAAGATTACATTAGAAGATTTAGGGTTTACTGTAGATGCAGTTAAAAATCAGTTAACAGGTATGGAAGAAGATTTAACAGACCCAGTAACTGGAGAACCATACCAAGATTCTTACTATCAAGCATTTATGGAACAAGCGGTTGCCATGGCTGAGAAGGAATTTGATATTGTTATTCGTCCTAGGCTTGATTATGACCGGCTTGATTTTTATCGAGGCGACTTCGATTCTTTTATGTATGTTAGAACTTATGAGCGTCCTATTTTGCATGTTAAGCAGGTTAAAATGTATTTGAATGACCAAACTATTCTCGACTATCCAGATAGGTGGATAAAAGTAACTAATCGTTTGGGGCAGATTGAGTTACAGCCCAGTTTATTAGCTGGTGGTTTTAATGCAAGTATGCAAGTGCCTTATTTATCAATATCAGGATATCCATTTGGTGTACCACCAGTATCACAGGACCAATTTTCCCCACAAATGTTAGGTGTTAGTTATATTGCTGGTATGATTCCACAACCAGAAGACCAACACGGAATAAACAGGGACTATTATCCTCATCCAGACTTGATTGCTTATTGTGCAAAGTATGCCGCAATTGAAGTTCTTGAACGCTGGGGTCGTACCGTTATTGGGGCCGGTATTGCTGGTTTCGATGTAAGTATAGACGGAATTAGCACAAATGTCAATAGTACCCAATCTGCTGAAAATACAGCTTCGACCGCCGATATTAAGCTAATGCAAGCAGACATGAAGCACATGAAGGATACTTTAATGGAATATTATGGTGGTAGAAATATAGGATTTATTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c17352246d0ed353a3c45581b1b3ad1ed344476cc8850523cbef1091801cbf1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7100
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lactobacillus phages that infect wine-derived L. plantarum strains Kyrkou,I., Byth Carstens,A., Ellegaard-Jensen,L., Kot,W. and Hestbjerg Hansen,L. 2018-12-03 — GenBank