Protein

View in Explore
Genbank accession
YP_009829563.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MNSFLKAILNTPTLTIRDDVTKLPVWKSLQVKKVEIYSPASVVSKPLATKDQTEAQVYTEALDIDVKNGKIIQPVRLRINAICPDLSTVESIMNAFNDNTSTFAITSKSILADKMAIMTLDVDQSPDMLNAAEINMEFEQVEPPVLNEFDPAFSQDRPTYGVQIQSLSDANLLDLGATGDSISSAAKSLYNRVTSYF
Physico‐chemical
properties
protein length:197 AA
molecular weight: 21682,43090 Da
isoelectric point:4,54299
aromaticity:0,06599
hydropathy:-0,09949

Domains

Domains [InterPro]
IPR054442
ATT
3–194
IPR054442
YP_009829563.1
1 197
Architecture
ATT
ATT 3-194 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PA01
[NCBI] 		2498591 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus PA01 >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009829563.1 [NCBI]
Genbank nucleotide accession
NC_048626.1 [NCBI]
CDS location
range 5191 -> 5784
strand -
CDS
TTGAACTCTTTCCTCAAGGCCATTCTCAACACGCCTACTCTCACTATTCGTGATGATGTAACCAAACTTCCCGTTTGGAAGAGTCTCCAAGTCAAGAAAGTGGAAATTTATTCACCGGCTTCCGTGGTGTCGAAGCCTTTGGCAACGAAAGACCAGACGGAAGCTCAGGTGTATACCGAAGCGCTGGACATTGATGTGAAGAACGGGAAGATCATTCAGCCTGTGCGGCTTCGCATCAACGCTATTTGCCCAGACCTGTCCACAGTTGAAAGTATCATGAATGCTTTCAATGATAATACCTCGACTTTCGCCATCACTTCCAAGTCGATATTGGCTGATAAAATGGCCATTATGACTCTCGATGTAGATCAATCTCCGGACATGCTAAATGCGGCTGAGATCAACATGGAGTTTGAACAGGTTGAGCCTCCAGTATTGAATGAATTTGATCCGGCTTTCTCTCAAGATCGCCCAACTTATGGCGTGCAGATTCAGTCCCTTTCCGATGCAAATTTGCTAGACTTGGGAGCCACCGGCGATTCGATATCTTCGGCCGCAAAATCGCTATATAATCGCGTGACCAGTTATTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
176d364fe17cdba045423f57e43bd0b47c358ee9e6c7650e77ca78392f523703
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7209
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome analysis of Pseudomonas aeruginosa PAO1 lytic phage PhiPA01 Ong,S.P., Miyanaga,K. and Tanji,Y. 2020-06 — GenBank