Protein

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Genbank accession
YP_010081515.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTIFKAYCWNPNTGRDFTIKKPNWNIVQRCSLKSIETIQFLPQHIYLLDGTTGSETSKRWQRKKCPDDWNRPFSYGSVITKPQGENKISGIAFCTDYERKQYPSLYPNFVTPNLTKGQKYGLSGTLYNPGINVLEVRLKLLYGTKNELVGTYRVQPNQYLDVKEIYTLPSTETVEKFGIAFEVAQTSDFVQFEVYLPKIEQGGEITPFVEDRDEFNGYRKTNTDDGTPPFTGTYEGTPPQSTDYKVYTWIGSKTDKELFYLEERGICKQEAVWCYSRPLNQRVLIGIDSDTYDTEAGRTLKFHVLNGNKGIFDLTGSVIYPEQFTDKRQTFDSDTKAWADNQEPLYVTDANTAIDCTFGEIASNIIEGYYYQQADKRYKVDELLRSAMVNTGYNMGSFWSDWSFDSYANEMRASYNIENCRISEKTNYSSMNEWTGSVSFPTGVVLAPYKPKLNETDTKKLKGVSSATSIWATGVLRTERSTEDWFREYENSRTRPVPTQILFANYNTKKAWLFQQQTNGTWSKSGEFTIPGSATAFARAWGIIPKNGELKGNVIMTDKSYVDFPANVRPITLGVEELFPVIKYNKVKFNPQMYATAYNTKLFWWGQKANVSSLTYGECGVRS
Physico‐chemical
properties
protein length:623 AA
molecular weight: 71314,18980 Da
isoelectric point:7,39290
aromaticity:0,13804
hydropathy:-0,60048

Domains

Domains [InterPro]
DC_0670
STR
1–623
DC_0670
YP_010081515.1
1 623
Architecture
STR
STR 1-623
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage PC_B1
[NCBI] 		2675263 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010081515.1 [NCBI]
Genbank nucleotide accession
NC_055017.1 [NCBI]
CDS location
range 18095 -> 19966
strand +
CDS
ATGACTATTTTTAAAGCGTATTGCTGGAATCCTAACACAGGTAGAGATTTCACAATTAAAAAACCTAATTGGAACATTGTACAACGTTGTTCTTTGAAGAGTATCGAAACAATTCAATTTTTGCCACAACACATCTATTTGTTAGACGGAACGACAGGTTCAGAAACAAGCAAGCGTTGGCAAAGAAAAAAATGTCCTGACGACTGGAATAGACCTTTTAGCTATGGTTCTGTCATCACTAAACCACAAGGAGAGAATAAAATAAGTGGTATTGCTTTTTGTACAGATTATGAAAGAAAACAGTATCCTAGTTTATATCCTAACTTTGTAACACCTAACCTAACAAAAGGGCAAAAATACGGCTTGTCAGGCACTTTATACAATCCAGGTATAAATGTACTAGAGGTACGGTTAAAATTGCTATACGGTACCAAAAATGAGCTTGTAGGTACATACCGAGTTCAACCTAATCAATACTTAGATGTAAAAGAAATTTACACGCTACCTAGTACGGAAACGGTTGAAAAGTTTGGTATAGCTTTTGAAGTGGCACAAACAAGCGATTTTGTACAATTTGAAGTGTATTTGCCTAAAATTGAACAAGGTGGAGAGATCACTCCGTTTGTTGAGGATAGAGATGAATTTAATGGCTATCGAAAAACCAACACAGACGACGGAACGCCGCCATTTACAGGGACTTATGAGGGTACACCACCACAAAGTACCGATTATAAAGTTTATACTTGGATAGGTTCTAAAACTGATAAAGAGCTTTTTTACTTAGAAGAAAGAGGAATTTGCAAACAAGAAGCCGTTTGGTGCTATAGTCGCCCCCTTAATCAACGTGTATTGATTGGAATTGATTCAGACACTTATGACACCGAAGCAGGCAGAACGCTCAAATTTCATGTTTTGAACGGAAATAAGGGCATATTTGATTTGACTGGTAGCGTCATTTATCCTGAACAGTTCACAGATAAACGTCAAACTTTTGACAGCGATACAAAGGCATGGGCAGATAACCAAGAACCGTTATACGTTACTGACGCAAATACTGCAATTGATTGTACTTTCGGAGAAATAGCAAGTAACATCATAGAGGGGTATTATTACCAACAAGCTGATAAACGTTACAAAGTAGATGAACTGCTTCGTTCAGCAATGGTTAACACAGGTTATAACATGGGTTCTTTTTGGTCTGATTGGAGCTTTGATAGCTACGCGAATGAAATGCGTGCAAGTTATAACATTGAGAATTGTAGGATTAGTGAAAAAACAAATTATAGTTCTATGAACGAATGGACTGGAAGCGTGTCTTTTCCTACTGGTGTTGTTTTAGCACCTTATAAACCAAAACTAAATGAAACGGACACTAAAAAACTCAAAGGGGTTTCTAGTGCAACAAGTATTTGGGCTACTGGTGTATTAAGAACAGAGCGAAGTACAGAAGATTGGTTTAGAGAATACGAAAATTCAAGAACTAGACCAGTACCAACGCAAATTCTTTTTGCTAACTATAACACTAAAAAAGCATGGTTATTTCAACAACAAACCAACGGAACGTGGAGCAAAAGTGGAGAATTCACGATACCAGGAAGCGCCACGGCATTCGCTAGAGCTTGGGGTATTATACCAAAAAATGGAGAATTGAAAGGTAATGTTATCATGACAGATAAGAGTTACGTTGATTTTCCTGCAAACGTTAGACCGATAACGCTAGGAGTGGAAGAACTGTTCCCAGTTATCAAGTATAACAAAGTTAAGTTTAACCCTCAAATGTACGCAACTGCTTACAATACCAAGCTATTTTGGTGGGGACAAAAGGCGAACGTAAGCAGCTTAACTTATGGGGAGTGTGGGGTTCGTTCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
28f91a57ddca7f5923306d44bdc5289d76b815d68d6a438ad0b37daadda32b72
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4634
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of 31 Lactococcus lactis Bacteriophages Isolated from Foods Marcelli,B., de Jong,A. and Kuipers,O.P. — — GenBank