Protein

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Genbank accession
UCR74972.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
Protein sequence
MAVVGVPGWIGSSAANETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGDLVSYSKDVPLFFMYGDTPNEYVQLNIHGVTMYGRGGNGGSNSPGSAGGHCIQNDIGGRLRINNGGAIAGGGGGGGGGYYSPFSQMRLTFGGGGGRPFGAPGGSIDMQSGATGGTISAPGSGSVNGIYNGGNGGEVGSAGGRCNIRGQGYEYDGGAAGYAVIGSTPTWQNVGAIYGPRV
Physico‐chemical
properties
protein length:260 AA
molecular weight: 26377,80060 Da
isoelectric point:7,69517
aromaticity:0,10000
hydropathy:-0,23423

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–140
DC_2135
UCR74972.1
1 260
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-140 | RBD 141-260
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UCR74972.1
1 260
Domain Start End Length (AA) Confidence
N-terminal 1 14 14 0,9412
Central domain 15 220 207 0,9538
C-terminal 221 260 39 0,4447
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-14
Central
15-220
C-terminal
221-260

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_C2-3
[NCBI] 		2876608 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UCR74972.1 [NCBI]
Genbank nucleotide accession
OK076929.1 [NCBI]
CDS location
range 9682 -> 10464
strand -
CDS
ATGGCAGTAGTTGGTGTTCCTGGTTGGATTGGAAGTTCAGCCGCAAATGAAACAGGACAGCGCTGGATGAGTCAAGCGGCTGGTCAATTAAGATTGGGTGTTCCTTGCTGGATGAGTCAATTTGCAGGTCGCTCACGAGAAATTATTCACACGCTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATTACAGGTGATTTAGTATCATATTCTAAAGATGTTCCTTTATTCTTCATGTACGGAGATACACCGAATGAATATGTTCAGTTGAATATACACGGCGTAACGATGTATGGACGTGGCGGTAATGGCGGTAGCAATAGTCCTGGTTCAGCTGGAGGTCATTGTATTCAAAACGATATTGGTGGGAGACTAAGAATTAATAATGGCGGAGCTATTGCAGGCGGCGGTGGCGGCGGTGGCGGCGGATATTATTCTCCTTTTTCACAAATGAGATTGACCTTTGGCGGCGGTGGCGGTCGTCCTTTTGGTGCGCCAGGCGGATCTATTGATATGCAATCAGGCGCGACTGGCGGTACTATTTCTGCACCTGGCTCAGGATCCGTGAATGGTATATATAATGGTGGAAACGGCGGTGAAGTAGGTTCAGCGGGAGGTAGATGTAATATTCGTGGTCAAGGATATGAATACGATGGCGGAGCTGCCGGTTATGCCGTCATAGGGTCTACACCGACATGGCAAAACGTTGGAGCAATATATGGTCCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b967e1ee39c0d1ddfb775fe37cc2b213df3ed85770d0733c7a27df63ed21c95
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8813
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages against multidrug-resistant Escherichia coli De Almeida Kumlien,A., Perez,C., Gonzalez-Villalobos,E., Borrego,C.M. and Balcazar,J.L. 2022-01 — GenBank