Protein

View in Explore
Genbank accession
YP_009997988.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAIPKVIFTESFQHLDVATYPIMNGGYNDASWIPDDMYVPNGQLDVSKIPLLTVDGRGLVNGGNCGVMLYAFRSDGSSSPNNFQWSASHPFGYPLSSTALSNQVAPVGFSVVPCPTRPGRKRFRFPGKKLAGRPLPFQGSTQWWGAVNSFSLRYNNPLAGIGEDDTASISFVVRFARRFSHQSGAQLAWYFSVGYPSVRVNPPGSAWTNYGITYMVPGFLASYVIFGSSQVLNLSSSTPQPNECYTPKDGLPWVYLDPGASASKLTVPNYTSPGLDGDFFKFEVDRDYHIEIKLMKNGDNRTTRPMSMVIIDGVTVKNYGGVTNTDFSVPNTGDLADSDRRDRDYLGAFQFNFQMNHWSGGSNSTTWFYPNMTEECGPIMISDIVFGTYPQSDHANYAFGPTTRVWGESPNTDIKTSFKRPEGASSNASVVGRPMKVNTPETSSELSGTIGDSDEYKTDGSSMPDFAGTVLAVQLKTVARAESSDGTIVSTFDGKEVGEVPLASSTGANYSTVVHTVEMSNPISPSDVAEKPFGFKVKEE
Physico‐chemical
properties
protein length:540 AA
molecular weight: 58761,80120 Da
isoelectric point:5,30867
aromaticity:0,11667
hydropathy:-0,33722

Domains

Domains [InterPro]
DC_0639
STR
1–540
DC_0639
YP_009997988.1
1 540
Architecture
STR
STR 1-540
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009997988.1
1 540
Domain Start End Length (AA) Confidence
N-terminal 1 288 288 0,0167
Central domain 289 487 200 0,4750
C-terminal 488 540 52 0,4070
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-288
Central
289-487
C-terminal
488-540

Taxonomy

  Name Taxonomy ID Lineage
Phage Proteus phage PM87
[NCBI] 		2048007 Uroviricota > Caudoviricetes > Casjensviridae > Lavrentievavirus PM87 >
Host Proteus mirabilis
[NCBI] 		584 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009997988.1 [NCBI]
Genbank nucleotide accession
NC_052981 [NCBI]
CDS location
range 20891 -> 22513
strand -
CDS
GTGGCAATACCTAAAGTAATATTCACCGAATCTTTCCAACATCTTGACGTAGCTACCTACCCCATAATGAATGGGGGGTATAACGATGCTTCATGGATTCCGGACGATATGTATGTGCCTAATGGCCAATTGGACGTTTCTAAGATCCCTTTACTGACGGTTGACGGTAGAGGCCTTGTTAACGGAGGGAATTGTGGGGTGATGCTTTACGCATTCCGTTCTGATGGGTCTTCCTCTCCTAATAATTTCCAATGGAGTGCATCACACCCGTTTGGGTATCCGCTATCGTCTACGGCGTTATCCAATCAAGTTGCGCCGGTGGGTTTTTCGGTTGTTCCTTGCCCCACAAGGCCGGGTCGGAAACGTTTTAGATTCCCCGGGAAGAAATTAGCTGGCCGACCTTTACCGTTCCAAGGGTCTACACAGTGGTGGGGGGCCGTTAATAGTTTTTCTTTGAGGTACAATAATCCGTTGGCCGGGATTGGAGAAGACGACACGGCGAGTATTTCGTTCGTAGTTCGTTTTGCCCGTAGGTTCTCACACCAAAGTGGCGCTCAACTGGCGTGGTATTTTTCTGTCGGGTATCCGAGTGTTCGGGTAAACCCGCCGGGGAGCGCTTGGACTAACTACGGGATAACATATATGGTTCCCGGATTCTTGGCTAGCTACGTTATTTTCGGAAGCTCGCAAGTGTTGAACCTTAGTAGTAGCACCCCGCAACCAAACGAATGTTATACTCCTAAAGACGGCCTACCTTGGGTTTACCTTGACCCGGGGGCTTCGGCCTCAAAATTAACGGTACCTAACTATACTTCTCCCGGGCTTGATGGTGACTTTTTTAAGTTTGAGGTGGACAGGGACTACCACATAGAAATAAAACTCATGAAGAACGGAGATAACCGCACAACGCGTCCTATGAGTATGGTTATTATTGACGGTGTCACGGTTAAGAACTACGGTGGGGTTACTAATACGGATTTCTCCGTGCCTAACACCGGGGATTTAGCCGACTCCGACCGGCGTGATCGAGATTATCTCGGTGCTTTCCAGTTTAATTTCCAGATGAACCACTGGTCAGGTGGGTCGAATTCTACCACTTGGTTCTATCCGAATATGACGGAAGAATGTGGCCCGATAATGATAAGTGATATTGTGTTCGGTACATACCCTCAATCCGACCATGCTAATTATGCTTTCGGCCCTACTACTCGCGTGTGGGGAGAGAGTCCGAATACAGACATAAAAACCTCGTTTAAGAGACCCGAAGGCGCCTCATCGAACGCTAGTGTAGTTGGAAGACCGATGAAAGTGAATACTCCTGAAACTTCGTCAGAACTATCAGGGACTATCGGGGACTCCGACGAATACAAAACGGACGGAAGTTCTATGCCGGATTTCGCCGGTACGGTTCTAGCAGTTCAACTAAAAACTGTCGCGAGAGCGGAATCCTCCGATGGCACTATCGTATCTACTTTCGACGGCAAAGAGGTCGGTGAAGTACCTTTAGCGTCTTCTACCGGGGCTAATTACTCTACGGTTGTCCACACGGTAGAGATGTCTAACCCGATATCTCCTAGTGATGTTGCGGAAAAACCTTTCGGATTTAAGGTGAAAGAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
86d72723594c984fa2259d9c875e984692a2d286ed4687ceb6c5df287547a7f9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5112
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50