Protein

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Genbank accession
URX65980.1 [GenBank]
Protein name
tail spike 3
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MISQFNQPRGSTSIEVNKQSIARNFGVKEDEVIYFTAGIDLSGFKVIYDESTQRAYSLPSGIVSGTTAISLNEQAILTHSAGSVDLGELAVSREEYVTLPGSFDTGVTVNTKNELVVFTDGKYRWDGALPKVVPAGTDPTLPGSGYIRCSNQFTSTQTREALRRSYATAGYNLVDGSFESGGTLVNANDVLLQERTGKAFSGPAGIVVAGTNPITGGYKVAGIYKHFSSFYEMIASTEAELPVDSVCSTGGTMWVRSASQPALTSFTPISAICGDDFGITAGESVSGQTISEFLTVAYTSGCRGYFKSVGEVTVTSNIELLSIDKNLVVDWTGIKLFGASDGVEMHLSSTEIRSSLLADMVSGSTVVQVDGAVEGDLIYIEDNKTYETQWNFNSRELFIAERESGSSMKVDRPALFNHLVANNVKVNRYKPVRLIFNNFKMEHFNNRDNSSFVNIGSASFGVSSSWFRGFYMPVFSGDVETSGGSSYLLIACYMPRIGNVVANRCQYPISPAAGTYDTVIDSITASFCRHAASPTTWFNKFEVKKCFGYNNFATMDSHAGFDAKWRNVFATEEYDMPNIRCLGGELTDINIVASLGTTPAEDPQIGIVTFTGDASMHRDWIATNVALNYKNRTDDIFALPWQADNVYYENINCMGGFIRCVNTASKIKTVTLTNINACVRLVGDCGNLKTLINNRVIPDDSLYMYENAPNGKKTTLWEVNCGHTSGASANKVLKIFDNYGTLESQNLLVKIKSCSSYNNGGSVAYIEKTYLVNHKLSANSSASISGPVNETRINGVTDSDISLNVTLTNSAGYTQSPDINAHFFELTIATTTSRPNNVFGITVEISKLN
Physico‐chemical
properties
protein length:849 AA
molecular weight: 92148,12800 Da
isoelectric point:5,22620
aromaticity:0,09894
hydropathy:-0,12721

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
DC_1953
STR
1–150
DC_1953 DC_0018
IPR040775
RBD
90–140
IPR040775
URX65980.1
1 849
Architecture
ATT
ATT 1-378 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URX65980.1
1 849
Domain Start End Length (AA) Confidence
N-terminal 1 286 286 0,9916
Central domain 287 700 415 0,9843
C-terminal 701 849 148 0,9629
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-286
Central
287-700
C-terminal
701-849

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PH4
[NCBI] 		2936921 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URX65980.1 [NCBI]
Genbank nucleotide accession
ON184126.1 [NCBI]
CDS location
range 2658 -> 5207
strand +
CDS
ATGATTTCTCAATTCAATCAACCACGCGGCTCCACTTCCATAGAAGTTAACAAACAATCTATCGCTCGAAATTTCGGTGTCAAAGAAGACGAAGTCATTTATTTCACTGCTGGTATTGATCTCAGTGGATTTAAAGTAATTTATGATGAGTCTACCCAACGGGCTTATTCTCTTCCTTCAGGTATTGTTTCAGGAACGACTGCGATAAGTCTGAACGAACAAGCCATCCTCACTCATTCCGCTGGTTCTGTTGACCTTGGGGAATTAGCAGTAAGCCGCGAAGAGTATGTAACCTTACCTGGTTCATTTGATACCGGTGTAACTGTTAATACTAAGAATGAATTAGTTGTATTTACTGATGGTAAGTACCGTTGGGATGGGGCATTACCTAAAGTAGTTCCTGCTGGCACAGACCCTACTCTTCCAGGGAGTGGTTATATTAGGTGCTCCAATCAGTTCACAAGCACACAGACCCGTGAGGCGTTGCGCCGTAGCTATGCAACAGCAGGCTATAATCTAGTAGATGGTAGCTTTGAGTCGGGCGGTACACTAGTGAACGCCAACGATGTGCTACTACAAGAACGCACTGGTAAGGCGTTCTCTGGTCCTGCTGGTATAGTTGTCGCTGGGACTAACCCGATAACTGGTGGTTACAAAGTTGCTGGAATATACAAACATTTCTCCTCTTTTTACGAGATGATTGCGTCCACGGAGGCAGAGTTACCTGTAGATTCAGTATGCTCAACCGGCGGTACAATGTGGGTCAGGTCTGCTTCCCAGCCAGCATTAACATCATTTACCCCTATAAGTGCGATTTGCGGGGATGATTTCGGCATAACCGCTGGAGAGTCTGTCTCTGGCCAGACTATATCTGAATTCCTAACTGTAGCTTACACATCAGGGTGCCGTGGGTACTTCAAGTCAGTCGGTGAAGTTACTGTAACCAGCAATATAGAACTATTGTCGATTGATAAAAACTTAGTTGTTGATTGGACTGGTATAAAGTTGTTCGGGGCATCTGATGGGGTGGAAATGCACTTGTCATCAACCGAGATTCGGTCTTCACTTCTAGCTGATATGGTAAGTGGCTCCACAGTTGTGCAGGTGGATGGGGCTGTAGAAGGAGATTTGATTTATATAGAGGACAACAAGACGTATGAGACTCAGTGGAATTTTAACTCAAGGGAGTTGTTTATTGCAGAGCGTGAATCTGGTTCTAGTATGAAAGTTGATAGGCCAGCGCTATTCAATCATTTAGTAGCAAACAACGTTAAGGTCAACAGGTACAAACCGGTAAGGTTGATTTTCAATAACTTCAAGATGGAGCACTTCAACAATCGTGATAACTCATCTTTTGTTAATATAGGCTCCGCATCATTCGGGGTTTCATCTTCATGGTTTCGTGGTTTTTATATGCCAGTCTTTTCTGGTGACGTGGAAACCAGTGGTGGTTCTTCGTACTTATTGATAGCCTGCTATATGCCAAGAATTGGCAATGTAGTTGCTAATAGGTGTCAGTATCCTATCAGCCCTGCGGCGGGTACTTACGATACAGTTATTGATAGCATCACAGCATCATTCTGTCGACATGCTGCCTCCCCAACAACATGGTTCAACAAGTTCGAGGTTAAAAAGTGCTTCGGTTATAATAACTTCGCCACGATGGACTCGCACGCTGGTTTTGATGCTAAATGGCGTAACGTATTTGCCACCGAAGAATATGATATGCCAAATATAAGATGTCTTGGTGGTGAGCTGACAGATATCAATATAGTTGCCAGTTTGGGCACAACCCCAGCAGAAGACCCTCAGATAGGTATCGTCACATTTACTGGTGATGCTTCTATGCACCGAGACTGGATCGCTACTAATGTTGCTCTAAATTATAAAAACCGGACGGATGATATTTTCGCATTACCGTGGCAGGCTGATAATGTCTATTACGAAAATATTAACTGCATGGGTGGTTTTATTAGATGTGTAAACACAGCATCAAAAATAAAAACAGTAACATTAACAAACATCAATGCCTGCGTGAGACTGGTAGGTGACTGCGGAAATCTGAAAACATTAATAAACAACAGGGTAATTCCAGATGATAGTCTCTACATGTATGAGAATGCACCGAACGGGAAGAAAACTACATTATGGGAAGTTAACTGTGGGCATACTTCGGGGGCTTCTGCTAACAAAGTTTTAAAGATTTTTGATAACTATGGAACATTAGAATCGCAAAACCTACTAGTAAAAATTAAGTCGTGTTCTTCATATAATAACGGAGGATCCGTTGCTTATATTGAGAAGACGTACCTAGTAAATCATAAGCTCAGCGCGAATTCTTCCGCGTCGATATCAGGACCTGTGAATGAAACTCGCATAAACGGCGTGACAGATTCGGACATATCACTCAATGTAACATTAACTAATTCTGCGGGATACACACAGTCACCAGATATAAACGCGCATTTCTTTGAGCTAACTATAGCTACAACCACAAGTAGACCGAATAACGTATTCGGTATAACTGTAGAGATATCAAAACTCAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
21cf71756949636488baed5257d1c20e9fe5963af66aa4e2b31b8653aa053aa1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7138
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50