Protein

View in Explore
Genbank accession
AWH14643.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSVSEPGKIITPWAESGLKNPIPPAANPATGRAGFDQGFSAINMTAKEAGGIPPFGQDFNGIFYEVTNILRYMQAGGQPTFDAALATAIGGYPKGAMVLGSDGVTLWQSKVDSNSTDPNTDPSDWGTFDIGLKADLAAPDGSDIVGFQQAGAGSVARTSQDKMREWVSVEDKGGIGDGVTDNAAAFANAASVARCVKVGAGVFFSSVPPAAMLFSDRGGSVKLGAQTYKLSTVPQVISPYEQTEPDGVVVRLSNMTVGQDCAPDMANGTTSYANTLTGTSAGKGIVDNVTRLSAYGGYICKELIKGYSIDAFGTNSCEWMAYGDRITLVGANSGKNLGNANPVGRHEYFKPSAPNPNDWDTRWPAWRTFAGAADAPAQVMTAGDYTNKATHLVGVGRNTFGFSITAKDSAALGYDAGTSVLYGQDNVFVGDRAGQWTIKCDFSTWVGCSAARSLMDSFQDTGVGYFAGSQYVHSKQNSVFGYQAMAGFQANLTDVPELNCFFGRISGANAVGSIKRNAGYGPSTLAAVRSDDNTALGSNSLLRLADPLKGKNTGVGADSLTLMQDLTNCTSIENSSGLGYRSRVSGDNQVQLGNSATTTYVFGTVQNRSDERDKDLSGPGAGTIDKALAVRMVRELSAKFYRWDMRDDYFEEYQVQVGIDIETAEPIFETRIRQLPKDGSKVRSRLHAGYLAGDVEKLLAAVGVDFGFYQDHSVNGGCDVKTLGYDEFIPITSTAVAAAWDKLDELERRIAALE
Physico‐chemical
properties
protein length:754 AA
molecular weight: 79856,89210 Da
isoelectric point:4,92370
aromaticity:0,09284
hydropathy:-0,24523

Domains

Domains [InterPro]
DC_0930
STR
1–352
DC_0930 DC_2098
IPR012334
STR
131–344
IPR012334 DC_0203
IPR030392
CHP
609–750
IPR030392
AWH14643.1
1 754
Architecture
STR
STR
RBD
STR 1-352 | STR 365-630 | RBD 631-754
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWH14643.1
1 754
Domain Start End Length (AA) Confidence
N-terminal 1 182 182 0,9879
Central domain 183 582 401 0,9854
C-terminal 583 754 171 0,9860
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-182
Central
183-582
C-terminal
583-754

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 62AhydR11PP
[NCBI] 		2163963 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWH14643.1 [NCBI]
Genbank nucleotide accession
MH179474.1 [NCBI]
CDS location
range 4681 -> 6945
strand -
CDS
ATGTCGGTATCTGAACCTGGCAAAATCATTACCCCGTGGGCCGAGTCTGGCCTCAAGAACCCCATCCCGCCAGCAGCGAACCCGGCAACCGGTCGCGCTGGCTTTGATCAGGGCTTCTCCGCCATCAACATGACAGCCAAAGAGGCCGGAGGGATCCCCCCATTCGGTCAAGACTTCAACGGCATTTTCTACGAAGTCACCAACATCCTTCGCTACATGCAGGCCGGGGGGCAGCCCACGTTTGATGCTGCGCTGGCAACTGCTATCGGCGGATACCCCAAGGGCGCCATGGTGTTAGGTAGTGATGGGGTGACGCTGTGGCAGAGTAAGGTTGACAGCAACTCCACTGACCCCAACACTGACCCATCTGACTGGGGGACGTTTGATATTGGGTTGAAAGCAGATCTAGCAGCGCCTGACGGGTCAGATATCGTAGGGTTCCAGCAGGCTGGTGCTGGTTCGGTTGCGCGCACGTCTCAAGACAAGATGCGCGAATGGGTTTCCGTTGAAGATAAAGGCGGGATAGGTGACGGCGTTACGGATAATGCCGCAGCATTTGCAAACGCGGCATCGGTGGCGCGGTGTGTAAAGGTCGGTGCAGGGGTGTTCTTCTCTTCCGTTCCGCCAGCGGCCATGCTGTTTTCCGACCGCGGGGGCTCAGTAAAGCTGGGCGCACAAACCTATAAGCTGTCCACCGTACCTCAGGTGATTTCACCATACGAGCAGACCGAGCCAGACGGTGTTGTTGTTCGCCTTAGCAACATGACTGTTGGGCAGGACTGCGCGCCGGACATGGCGAACGGGACGACCAGCTACGCAAACACATTGACCGGCACTTCGGCAGGGAAAGGCATTGTCGATAACGTCACCAGACTCTCTGCATACGGTGGTTACATCTGCAAAGAACTAATCAAGGGGTACAGCATTGATGCCTTCGGCACCAACTCATGTGAGTGGATGGCCTACGGTGACCGCATCACACTGGTCGGAGCCAACTCGGGCAAGAACCTCGGCAATGCCAACCCTGTCGGCCGCCATGAGTACTTCAAGCCGTCAGCTCCAAACCCCAATGATTGGGATACTAGGTGGCCAGCGTGGCGCACTTTTGCAGGTGCTGCTGATGCCCCAGCTCAAGTTATGACTGCTGGTGACTACACGAACAAGGCAACCCACTTAGTAGGTGTTGGTAGGAATACCTTTGGCTTTAGTATTACAGCAAAGGACTCGGCAGCACTTGGTTACGATGCCGGGACCTCAGTGCTGTACGGACAAGACAACGTTTTTGTCGGTGACAGGGCTGGTCAGTGGACGATTAAGTGCGATTTCAGCACTTGGGTCGGCTGCTCAGCTGCCAGGTCTCTTATGGACTCGTTCCAGGATACTGGGGTAGGTTATTTTGCCGGGTCACAATACGTCCACTCAAAGCAGAACTCCGTATTTGGCTATCAGGCTATGGCGGGGTTTCAGGCAAATCTTACTGACGTGCCTGAGTTGAACTGCTTCTTTGGACGCATATCTGGGGCTAATGCAGTTGGTTCAATTAAGAGAAACGCAGGTTACGGTCCAAGCACTCTGGCAGCCGTGCGGAGTGATGACAACACTGCGCTCGGTTCAAACTCACTTCTTCGGCTGGCTGACCCACTCAAGGGGAAGAACACGGGGGTCGGCGCTGACAGCCTAACGCTGATGCAAGACCTGACGAATTGCACATCCATTGAGAACAGTTCCGGGCTTGGCTATCGGTCTCGGGTGTCTGGGGACAATCAGGTACAACTGGGGAACTCAGCCACAACGACCTATGTTTTCGGCACCGTCCAGAACCGATCTGATGAGCGTGACAAAGACCTTAGTGGGCCAGGTGCTGGCACCATAGATAAAGCCCTAGCCGTGCGCATGGTCCGTGAGCTTTCCGCTAAGTTCTATCGATGGGACATGCGAGATGATTACTTCGAGGAGTATCAGGTTCAGGTCGGTATCGATATAGAGACGGCTGAACCTATCTTTGAAACTCGCATCCGCCAGTTGCCGAAGGATGGCAGCAAGGTTCGCAGTCGCTTACATGCAGGCTATCTTGCCGGAGATGTTGAGAAATTGCTTGCAGCAGTCGGGGTGGATTTCGGGTTTTACCAAGACCATAGCGTCAACGGCGGATGCGACGTAAAAACGCTGGGTTATGACGAGTTTATCCCCATTACCTCTACCGCTGTCGCTGCCGCATGGGACAAGCTCGATGAATTGGAAAGGCGGATAGCTGCGCTTGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
37a9ab200faea33f84ca2e329173fcbdbca224efd939b5ea1cdddda57a17ad60
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8134
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of new Aeromonas and Pseudomonas phages promising in phage therapy dedicated to aquaculture Kolsut,J., Wojcik,E., Wojtasik,A. and Dastych,J. 2005-10-01 — GenBank