Protein

View in Explore
Genbank accession
ARQ96714.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,78
Protein sequence
MSSNYCVKLTQEILVLSMTTANPINFTSLQFSLSVNSLVIFLFSKYPFNSGYANNFCVNQDEFGFAQVGQSFNIDLTNYQGYYMLILIYPEGINLTSVRSCDIVPNLTMTFQNTTISPIESETIINNFDGQFETDFCACYQGQSHTIGTTCSNSNYVPAISLNNLNNQLVIITCQAFYPTSNTTVEFVTPTTCSYFGAYLTAEITFIGNQQVIDFLNSNNISYSISSSTSCQAFSSISPCGLPCRSVYQISQLLSPPLKYSLITSKLWNEIVNDLYLAYTIFKYINYLSQFPYIQNIYHAISDFYNFYENFQPYVFKPLIHARKGLPLTADYFNSLIDTIIELANFANIQLRQGISHVQPDQIVKSLQFDNIIYNVNQLLTFNYNQYFLLSCYGNEFNNLLSSITTFLNVLISNPMINITIPNNVYIKNFLIYNNFNTITIYGTIANLVMNLNSGTIQLQDFSSINFLVLQNNSGIIELNNESNIHNLSINQNPGTININNNSTVNTIQIQNNSGIININDNAIIENLICSQNIGTVNISSNAIVINNQCSS
Physico‐chemical
properties
protein length:552 AA
molecular weight: 62094,41320 Da
isoelectric point:4,47882
aromaticity:0,12500
hydropathy:0,10761

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARQ96714.1
1 552
Domain Start End Length (AA) Confidence
N-terminal 1 551 551 0,9990
Central domain 552 551 1 0,4537
C-terminal 552 552 0 0,0000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-551
Central
552-551
C-terminal
552-552

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfolobus islandicus rod-shaped virus 11
[NCBI] 		1983546 No lineage information
Host Sulfolobus islandicus
[NCBI] 		43080 cellular organisms > Archaea > Thermoproteati > Thermoproteota > Thermoprotei > Sulfolobales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARQ96714.1 [NCBI]
Genbank nucleotide accession
KY744234 [NCBI]
CDS location
range 20894 -> 22552
strand +
CDS
ATGTCTTCAAATTATTGTGTTAAATTAACGCAAGAAATTTTAGTATTGTCTATGACTACAGCAAATCCTATAAATTTTACATCTTTACAATTTTCATTATCTGTAAATTCTTTGGTTATTTTCCTATTCTCGAAATATCCATTTAATTCTGGTTATGCAAATAATTTTTGTGTAAATCAAGACGAATTTGGTTTCGCTCAGGTTGGACAAAGTTTCAACATAGATTTAACAAATTATCAAGGATATTATATGTTAATTTTAATTTATCCTGAAGGAATTAATTTAACTAGTGTTAGAAGTTGTGATATTGTTCCAAATTTAACTATGACTTTTCAAAATACAACAATTTCGCCAATTGAAAGTGAAACAATAATTAATAATTTTGATGGACAATTTGAAACAGATTTTTGTGCATGTTATCAAGGTCAAAGTCATACAATAGGAACTACATGTTCAAATTCAAATTATGTTCCAGCAATTTCATTAAATAATCTAAATAACCAATTAGTAATTATAACTTGTCAAGCATTTTATCCTACAAGTAATACAACTGTAGAATTTGTAACGCCAACTACATGCTCTTATTTTGGTGCATATTTAACAGCAGAAATAACATTTATTGGAAATCAACAAGTCATAGATTTTCTAAATAGTAACAATATATCATATTCTATTTCTTCTTCTACTTCATGTCAAGCATTTTCAAGTATATCGCCATGCGGATTACCTTGCAGATCAGTTTACCAAATTTCACAATTATTATCTCCGCCGCTTAAATATTCATTGATTACCTCAAAATTGTGGAATGAAATAGTTAATGATTTATATTTAGCTTACACCATATTTAAATATATTAATTATTTATCTCAATTTCCATATATACAAAATATATATCATGCAATTTCAGATTTCTACAATTTCTATGAAAACTTTCAACCTTACGTATTTAAACCACTTATTCATGCTAGAAAAGGACTTCCTTTGACAGCTGATTATTTCAATTCTTTAATAGATACAATTATAGAATTAGCAAATTTTGCTAATATACAATTACGACAAGGAATTTCTCATGTCCAGCCTGACCAAATCGTAAAATCTTTACAATTCGATAATATAATATATAATGTAAATCAACTTCTAACTTTTAATTATAATCAATACTTTTTACTTAGTTGTTATGGGAATGAATTTAATAATTTATTGAGTTCAATAACTACATTCCTAAATGTCTTAATTTCGAATCCTATGATCAATATCACAATTCCAAATAATGTCTATATTAAAAACTTCCTAATTTATAATAATTTTAACACTATTACTATTTATGGGACAATTGCTAATCTTGTAATGAATTTAAATTCTGGAACTATACAATTACAAGACTTTTCATCTATAAATTTTCTCGTTTTACAAAATAATTCAGGAATAATAGAACTCAATAATGAATCCAATATACATAATTTATCAATTAATCAAAATCCCGGAACTATTAATATCAACAATAATTCAACTGTAAATACAATACAAATTCAAAATAATAGTGGAATAATTAATATCAATGATAATGCAATAATTGAAAATCTAATTTGTAGTCAAAATATTGGAACTGTAAATATTTCATCGAATGCGATAGTTATAAATAATCAGTGCAGTTCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f8486c32c27a320af699a8ca5bb92fb52585a225c978be4b7472a88da9a45101
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5698
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Differentiation and structure in Sulfolobus islandicus rod-shaped virus populations Bautista,M.A., Black,J.A., Youngblut,N.D. and Whitaker,R.J. 2017 — GenBank