Protein

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Genbank accession
YP_009790910.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRIEGLYPSPIHGVSTLSPRNRRRGTAGLQVNFRSDPVKKLTRRPPLQYETVLRNQITYGDIHHHRYTRDGVVYRILIDKSDGTVTAFRDNQPITVAGDLSDYIGYDITTQTVDGTTYVVNKETEVEMLPDIEDGNIERVSHVNVTAALAYGETLRVNITQSDGTRTSRIVVVPALIASGNPEDPPDYDRADKARATSAVAKQLAENINNSIPDTSLNAAAFGSTVAIWEDGRNNWVDVEIETGQGDRSTIAINRTIENVDGLPLYAVVGTRIKVRPNPTSEKGVYYLQAERTSDIPTGEPLEEVVWAESRSPVEPYKFDTSTMPHQIKFQENNVLVGEVEWKDRQVGDDESVPQPEFVGQTITGMSYFQKRLVFLSENFAIMSETDDVRNFWRQSAVNLLVSDMVSISSSAIGVDKLEYIVPHNRDLLIVSSNAQFKIDGSTAITPQTVSMALTTKYDCQTSVPPVTMGNSVFFPIDYGNSTGLQEYTGEKDTGQDFATPVTHEVIGYMQGKARVLTASPNLNMIVMLTNTIYDSALYVYEKSTVKDSAVGSWSEWDFGGGAEIIDAYFQNDELELICVEDSNVYLKVMRMYSQVQEDVDVYLDDLLVLDTQGATGTLAYLPNYYVQEDLICVRGKGTDNELFKVGFEITGNTIVFNEPIGQGKVYVGKLYESRYRPTRPFRYNEDGQAITTDRLRVGRFTLGLVETNEIKMSIVSDFYDTPDQVFNSRYVNGLANKLGTIPFYTGNYKFSYAQDANLADVEFYCDNWLGCTINSISWEGQYYQSKGRM
Physico‐chemical
properties
protein length:790 AA
molecular weight: 88395,69420 Da
isoelectric point:4,69805
aromaticity:0,09747
hydropathy:-0,36557

Domains

Domains [InterPro]
DC_0058
STR
1–790
DC_0058
IPR058003
TTP
5–788
IPR058003
YP_009790910.1
1 790
Architecture
STR
STR 1-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009790910.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 135 135 0,9944
Central domain 136 339 205 0,0375
C-terminal 340 790 450 0,1266
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-135
Central
136-339
C-terminal
340-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage vB_AspP-H4/4
[NCBI] 		2928692 Uroviricota > Caudoviricetes > Autographivirales > Foturvirus H44 >
Host Alteromonas sp.
[NCBI] 		232 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009790910.1 [NCBI]
Genbank nucleotide accession
NC_047834 [NCBI]
CDS location
range 27151 -> 29523
strand +
CDS
ATGCGAATAGAAGGTTTATACCCATCACCTATTCATGGTGTAAGTACATTATCTCCACGTAACAGACGTAGAGGTACAGCAGGGTTACAAGTAAACTTTAGGTCAGACCCAGTTAAGAAATTAACACGCCGACCACCATTACAGTACGAGACAGTACTACGTAACCAGATAACATATGGTGACATTCATCATCATAGATACACAAGAGACGGTGTAGTATATCGTATACTGATTGACAAAAGTGATGGTACAGTTACAGCGTTTAGAGACAATCAACCTATAACAGTTGCTGGTGATTTATCAGATTACATTGGCTATGACATTACGACCCAGACAGTTGACGGCACTACATATGTAGTTAACAAAGAGACTGAGGTTGAAATGTTACCAGATATTGAAGACGGTAACATTGAGCGTGTAAGTCATGTAAACGTTACAGCAGCTTTAGCGTATGGTGAGACACTTAGGGTTAATATAACTCAGAGTGATGGTACTCGTACTAGTAGAATAGTCGTTGTACCTGCGTTGATTGCTTCCGGTAATCCAGAAGACCCACCAGACTATGATAGAGCAGATAAAGCGAGAGCAACTAGTGCTGTAGCAAAACAGTTAGCAGAGAACATCAATAACTCTATACCAGACACGTCACTGAATGCAGCAGCATTTGGTTCAACAGTTGCTATCTGGGAAGATGGTAGAAACAACTGGGTAGACGTAGAGATTGAGACTGGTCAAGGTGATAGGTCAACCATAGCTATTAACCGTACCATCGAGAATGTGGATGGGTTACCACTGTATGCTGTAGTAGGAACACGTATTAAAGTACGTCCGAATCCTACATCAGAGAAAGGTGTGTACTATCTACAAGCAGAACGTACCAGCGACATTCCTACTGGTGAGCCATTAGAAGAAGTTGTATGGGCAGAATCGCGTAGTCCTGTAGAACCGTATAAGTTCGATACATCTACAATGCCACATCAGATTAAGTTCCAAGAGAATAACGTACTGGTGGGTGAAGTAGAATGGAAAGATAGACAGGTTGGTGACGACGAATCAGTACCACAACCAGAGTTTGTAGGTCAGACTATTACTGGTATGAGTTACTTTCAGAAACGTTTAGTATTCCTGTCTGAAAACTTTGCCATTATGTCAGAGACAGATGATGTACGTAACTTCTGGAGACAGTCGGCAGTTAACCTATTAGTAAGTGACATGGTATCAATATCATCGTCAGCTATAGGTGTTGATAAGTTAGAGTACATAGTACCTCATAACAGAGACTTATTAATTGTATCATCTAATGCACAGTTTAAGATTGATGGTAGTACAGCGATAACACCACAAACTGTTAGTATGGCACTTACAACTAAGTATGATTGTCAAACGTCAGTACCTCCAGTAACAATGGGTAACTCCGTATTCTTCCCAATTGACTATGGTAACTCAACAGGGTTACAAGAGTACACAGGGGAGAAAGACACTGGACAAGACTTTGCTACACCTGTAACACATGAAGTGATTGGTTATATGCAAGGTAAAGCACGGGTACTAACAGCGTCACCTAACTTAAACATGATAGTGATGTTGACTAACACAATATACGATTCAGCATTATACGTGTATGAGAAATCTACTGTTAAAGACAGTGCTGTAGGTTCATGGAGTGAATGGGATTTTGGTGGTGGTGCAGAGATTATAGATGCATACTTCCAGAATGACGAATTAGAACTAATATGTGTAGAAGATAGTAATGTATATCTAAAAGTTATGCGTATGTACTCACAGGTACAAGAAGATGTAGACGTATACTTAGATGATTTACTGGTACTAGATACACAAGGTGCTACAGGAACGTTAGCGTACTTACCAAACTATTACGTACAAGAGGACTTAATCTGTGTACGTGGTAAAGGTACAGACAATGAACTGTTTAAAGTTGGCTTTGAAATCACTGGTAACACTATTGTATTCAATGAGCCAATAGGTCAGGGTAAGGTATACGTAGGTAAACTGTACGAGTCACGCTATAGACCAACAAGACCATTTAGATACAACGAAGATGGTCAAGCTATTACAACAGATAGATTACGTGTTGGTAGATTTACGTTAGGGTTAGTAGAAACTAACGAGATTAAAATGAGTATAGTGTCTGACTTCTACGATACACCAGACCAAGTATTCAATAGTAGGTACGTTAACGGGTTAGCTAATAAGTTAGGTACAATACCTTTCTACACTGGTAACTATAAGTTCTCGTATGCACAAGATGCTAACTTAGCAGATGTTGAGTTCTATTGTGATAACTGGTTAGGCTGTACTATCAATAGTATTAGCTGGGAAGGTCAGTATTACCAAAGTAAAGGTAGAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
95dbffa3985939bed290cea10c334ac86f42dec7dd396d7d5ebcf33c0f8dd6f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50