Protein

View in Explore
Genbank accession
QZI78922.1 [GenBank]
Protein name
straight tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSNNTYQHVSNESKYVKFDPVGSNFPDTVTTVQSALSKISNIGVNGIPDATMEVKGIAMIASEQEVLDGTNNSKIVTPATLATRLLYPNATETKYGLTRYSTNEETLKGSDNNSSITPQKLKYHTDDVFKNRYSSESSNGVIKISSTPAALAGVDDTTAMTPLKTQKLAIKLISQIAPSEDTATESVRGVVQLSTVAQTRQGTLREGYAISPYTFMNSVATQEYKGVIRLGTQAEINNNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGIAPEGDSSGALAWNADVINTRGGQTINGSLNLDHLTANGIWSRGGMWKNGDQPVATERYASERVPVGTIMMFAGDSAPPGWIMCHGGTVSGDQYPDYRNTVGTRFGGDWNNPGIPDMRGLFVRGAGTGGHILNQRGQDGYGKDRLGVGCDGMHVGGVQAQQISYHKHAGAWGENGNNRGYAPFGASNGSGYLGNGRSADWDNHLFFTNDGFEMGGARDSFGTLNREGLIGYETRPWNISLNYIIKIHY
Physico‐chemical
properties
protein length:518 AA
molecular weight: 55381,75000 Da
isoelectric point:6,22503
aromaticity:0,07722
hydropathy:-0,45888

Domains

Domains [InterPro]
DC_0176
STR
1–437
DC_0176
IPR015173
STR
246–324
IPR015173 IPR037053 IPR044916
G3DSA:2.10.280.10
Unmapped
246–286
G3DSA:2.10.280.10 SSF88874
SSF69349
STR
246–346
SSF69349 IPR027448
IPR011083
ATT
337–392
IPR011083
QZI78922.1
1 518
Architecture
STR
ATT
STR
STR 1-323 | ATT 324-392 | STR 393-516 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM-101112UKE3-1
[NCBI] 		2865790 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI78922.1 [NCBI]
Genbank nucleotide accession
MZ234013.1 [NCBI]
CDS location
range 132176 -> 133732
strand -
CDS
ATGAGTAATAATACATATCAGCACGTATCAAATGAATCAAAATATGTTAAATTCGATCCAGTTGGATCGAATTTTCCTGACACTGTTACGACAGTGCAGTCTGCATTATCAAAAATAAGTAATATCGGCGTAAATGGTATTCCTGATGCAACTATGGAAGTTAAAGGAATAGCAATGATTGCGTCAGAGCAAGAGGTTTTAGATGGAACTAATAATTCTAAAATCGTTACACCAGCTACATTAGCAACAAGATTATTGTATCCAAATGCTACTGAAACTAAATATGGTTTAACGCGTTATTCAACAAATGAAGAAACATTAAAAGGCTCAGATAATAATTCATCAATAACACCACAAAAACTGAAATACCACACTGACGATGTGTTCAAAAATAGATATTCGTCTGAGTCATCAAACGGGGTTATTAAAATATCATCTACACCTGCAGCTTTGGCTGGAGTTGATGATACTACGGCGATGACTCCGCTGAAAACCCAAAAACTTGCAATAAAATTAATTTCACAAATAGCTCCTTCAGAAGACACTGCAACAGAATCTGTGAGAGGAGTAGTTCAATTATCTACTGTTGCACAAACTCGTCAAGGAACTCTCCGCGAAGGATATGCAATTTCCCCGTATACCTTTATGAATTCTGTTGCAACACAAGAATATAAGGGTGTTATACGTCTAGGAACACAAGCAGAAATTAATAATAATTTGGGGGATGTTGCAGTAACAGGTGAAACACTAAATGGTCGAGGAGCTACCGGTTCTATGCGTGGGGTAGTAAAATTAACGACGCAAGCTGGTATTGCTCCTGAAGGTGATAGCTCTGGGGCATTAGCCTGGAACGCAGATGTAATTAATACTCGTGGTGGACAAACTATTAATGGTTCTTTAAATTTAGACCATCTTACAGCAAATGGAATTTGGTCACGCGGTGGAATGTGGAAAAATGGCGATCAACCTGTTGCCACTGAAAGATATGCGTCCGAACGAGTTCCGGTTGGAACTATTATGATGTTTGCGGGTGATTCAGCACCTCCAGGTTGGATTATGTGTCATGGTGGAACTGTGTCAGGAGACCAATATCCTGATTATAGAAACACGGTTGGAACAAGATTTGGTGGGGATTGGAATAATCCAGGGATTCCTGATATGCGAGGTCTTTTCGTCAGAGGAGCGGGCACCGGTGGTCATATTTTAAATCAACGAGGACAAGATGGTTATGGGAAGGATAGACTTGGTGTAGGATGCGATGGAATGCATGTTGGCGGTGTTCAAGCACAACAAATATCATACCATAAACATGCTGGCGCCTGGGGGGAAAATGGAAATAACAGAGGTTATGCACCGTTTGGCGCATCTAATGGCAGTGGATATTTGGGCAATGGTAGAAGCGCCGACTGGGACAACCATTTGTTCTTTACTAACGACGGATTTGAAATGGGTGGGGCTCGTGATTCGTTCGGCACGTTAAATCGCGAAGGGTTAATTGGTTATGAAACTAGACCATGGAATATATCATTAAACTATATTATTAAAATTCATTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b5be8c0b685c3a16bb657b0de74f48dd8bd8b48ed70925dcd81d678ff4c93c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Naturally bred epsilon2 phages have an improved host range and effectivity in uropathogenic E. coli over their ancestor phages Saez,D., Loose,M., Mutti,M., Visram,Z., Hitzenhammer,E., Dippel,D., Tisakova,L., Schertler,S., Wittmann,J., Corsini,L. and Wagenlehner,F. 2020-05-19 — GenBank