Protein

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Genbank accession
YP_006987359.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MSIRFNHATNTMTSTNSASIVVEGGTPSVPRPLRLNASSVVFPNKALPTGEAGAVVFDTASKTLKYHDGFQWVELLSQDEILEPIQISLTEIYNQLANRVSSVTYSSSAVPSASVSGTNLNIVFPTSSGGSGAAVPGLFTSSPPGSIMHYSLTSGQSVASIREQMSGVSGGQNGRNGTVSAPFVTKTGWCFADGMYWTWNGSDGAVTKVVPNLNQEAYLKGITTSGVTKTDAIITGSGTISSTSITMPEHYHGTGMMRGLGGDHGDDGVFIIGKTWNDGRTYTGAIITGDKQQYWTTAADGSDTRRAFTTTYPIYQSGNTSTHTHNLTGIDVGHFNVAVLYNIAEPSLALNQANGDARYVLKSGDVMSGSLTIANSAAIQANDTNLILWFRNASGGERGAIYHSTTTNTLRFRSAGGTEMALSNTGVLTVAGLTVSSQGATVGGRNIVRSINGSTADANGNVTLSITGGVVTNVRRGAEIAVNRYSLGDESFVYRCGEGQYVTGFNIWSKSNNNDEFRDMYSRPVQILIDGTWRTISDV
Physico‐chemical
properties
protein length:539 AA
molecular weight: 56892,37430 Da
isoelectric point:6,20883
aromaticity:0,07978
hydropathy:-0,17699

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006987359.1
1 539
Domain Start End Length (AA) Confidence
N-terminal 1 113 113 0,9612
Central domain 114 335 223 0,8452
C-terminal 336 539 203 0,9400
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-113
Central
114-335
C-terminal
336-539

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_GAP32
[NCBI] 		1141136 Uroviricota > Caudoviricetes > Mimasvirus >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006987359.1 [NCBI]
Genbank nucleotide accession
NC_019401 [NCBI]
CDS location
range 188769 -> 190388
strand +
CDS
ATGAGTATAAGATTTAATCATGCTACCAATACAATGACTAGCACGAATTCTGCTTCTATAGTCGTAGAAGGTGGAACACCTAGTGTTCCACGTCCTTTGAGACTGAATGCTTCTTCGGTTGTTTTTCCGAATAAAGCATTACCAACAGGTGAAGCTGGTGCAGTAGTTTTCGATACTGCATCAAAAACATTAAAATACCATGATGGTTTCCAATGGGTGGAATTATTATCACAAGATGAAATACTTGAACCAATTCAAATTTCACTAACTGAAATTTATAACCAATTAGCTAACCGTGTTAGTTCTGTGACATATAGTTCTAGTGCAGTTCCAAGTGCAAGTGTTAGTGGAACTAACTTAAATATCGTTTTCCCAACAAGTTCTGGAGGCAGTGGGGCCGCCGTTCCTGGCTTGTTTACTTCATCACCTCCCGGAAGTATAATGCATTATTCTTTAACTTCTGGACAATCAGTAGCAAGTATTCGAGAACAAATGAGCGGAGTTAGTGGTGGACAAAATGGTAGAAATGGTACAGTTAGTGCACCTTTTGTAACTAAAACTGGTTGGTGTTTTGCAGATGGTATGTACTGGACATGGAATGGTTCAGATGGTGCAGTAACTAAAGTTGTACCGAACTTGAACCAAGAAGCTTACTTGAAAGGTATTACCACAAGTGGTGTAACAAAAACTGATGCTATTATAACAGGTTCAGGAACTATCAGTTCAACCTCAATCACAATGCCTGAACACTATCACGGTACTGGTATGATGCGTGGCTTAGGTGGAGATCACGGTGATGATGGTGTATTCATTATTGGTAAAACTTGGAATGATGGTCGTACCTATACTGGTGCAATCATTACTGGTGATAAACAACAATATTGGACAACTGCTGCTGACGGCTCTGACACTCGTCGTGCTTTCACAACAACTTATCCAATTTACCAAAGTGGTAATACTTCAACACATACCCATAACTTAACGGGTATTGATGTTGGACATTTTAACGTTGCAGTACTGTACAATATTGCAGAACCAAGCTTAGCATTGAATCAAGCCAATGGTGATGCTCGCTATGTGTTAAAATCCGGTGATGTTATGAGTGGTTCATTAACTATTGCCAACAGTGCAGCCATTCAAGCTAATGATACTAACTTAATATTATGGTTCCGTAATGCTAGTGGTGGTGAACGTGGAGCTATCTATCATAGTACTACAACTAACACCTTACGATTCCGTAGTGCTGGTGGCACAGAAATGGCATTGTCCAACACTGGCGTATTAACTGTAGCTGGATTGACAGTATCAAGCCAAGGAGCTACGGTCGGTGGACGTAATATTGTTAGATCAATTAATGGGTCAACTGCTGATGCTAATGGTAATGTAACATTGAGTATTACCGGTGGTGTAGTAACGAACGTTCGCCGTGGTGCAGAAATTGCAGTTAACCGTTATTCGTTAGGTGATGAATCATTTGTTTATCGTTGTGGCGAAGGCCAGTATGTAACTGGTTTCAATATTTGGTCAAAAAGTAATAATAATGATGAATTCCGTGATATGTATTCTAGACCTGTACAAATTCTAATTGATGGAACGTGGAGAACTATTTCTGATGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0b0af1d63a2cdf636ed9447ca241e49d8d9e48a45f1ff250c19c4e21a7162192
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5607
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50