Protein

View in Explore
Genbank accession
WPK37743.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MSIDLPVIKIRNLSDKVLVSDTDELIIQSSVDTEKTTISKFISDIGILKKGDIMDVSGASLVGTHSGSTVQQVLDSLSNKWQNLSNGYYFATSGNEVGTYADTISISPVQRSYGVQISTSLAAFYPKRDNFISNGTTALRWNQVYAVNSVISTSNKKKKTNLRQISTAEVKAFYEIGKLDSVWQWLAKYSSEKGLARLHSGPTVQDAIKIMLKYGLDWTKYSAFCYDKWEANGDNPAGEEYAFRKEELLFWILRATIAVQEDLDKRLSALEDSLSGN
Physico‐chemical
properties
protein length:277 AA
molecular weight: 30814,38190 Da
isoelectric point:6,18689
aromaticity:0,09747
hydropathy:-0,28159

Domains

Domains [InterPro]
DC_0783
STR
10–242
DC_0783
IPR036388
RBD
140–235
IPR036388
cd10144
CHP
154–258
cd10144
IPR030392
CHP
154–274
IPR030392
IPR030392
CHP
154–213
IPR030392
WPK37743.1
1 277
Architecture
STR
CHP
STR 10-242 | CHP 243-274 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV124
[NCBI] 		3077269 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK37743.1 [NCBI]
Genbank nucleotide accession
OR352954.1 [NCBI]
CDS location
range 99806 -> 100639
strand -
CDS
ATGTCAATTGATTTGCCAGTCATTAAGATAAGAAATCTTTCTGATAAGGTGTTGGTATCAGATACTGATGAGCTAATCATCCAGTCATCTGTTGATACAGAAAAAACCACTATTAGTAAGTTCATTTCTGATATTGGAATCTTAAAGAAAGGTGATATCATGGATGTCTCAGGGGCCTCTTTGGTCGGGACACATTCAGGATCAACTGTCCAGCAAGTTCTGGACAGTCTTTCAAACAAGTGGCAAAATCTATCTAATGGGTATTATTTTGCCACCTCTGGAAACGAAGTTGGGACATATGCAGATACAATATCTATAAGCCCAGTGCAAAGATCTTATGGTGTCCAGATATCTACATCATTAGCAGCATTTTACCCTAAGCGGGATAACTTTATTTCAAACGGTACTACAGCTCTTCGTTGGAATCAAGTTTATGCTGTGAATAGTGTGATTTCTACTTCCAATAAGAAAAAGAAAACCAACCTTCGCCAAATTTCAACCGCAGAAGTAAAAGCGTTCTATGAGATTGGAAAACTAGACTCTGTCTGGCAATGGTTGGCAAAATACTCTTCTGAAAAAGGTTTAGCTAGACTCCATTCGGGACCTACTGTACAAGATGCTATCAAGATTATGCTTAAGTATGGTCTTGATTGGACGAAATACTCAGCATTTTGCTATGATAAGTGGGAAGCTAATGGTGATAACCCAGCAGGCGAGGAGTACGCTTTCAGAAAAGAAGAGCTTTTATTCTGGATACTTAGAGCAACAATAGCGGTGCAGGAGGATCTTGACAAGCGCCTTTCAGCCTTGGAAGACTCTTTGTCCGGCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ded9e7218f70179e63019dc91757db482387004bf0cb536c44c966b25c8fe4a7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7980
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank