Protein

View in Explore
Genbank accession
ADO98427.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 0,70
TF
Evidence RBPdetect
Probability 0,51
Protein sequence
MKLNVGEIRGLLANSYNITVPSETSISFETGAQLTHTTLGTSHMVVPYGTTTEWDNQVRVHQKDFLNGQMRWNTTDQQLQFYYNGWMNMVSGIAVGDIGSQTNPAVDGNAIYRAGKSSGIYWIQPEGQSAYQMYVNNDDNGGGWVLCVHARTSTCQDHMTTGSVRISGTTGPRTNNTSTTKMADSWIQALRNSSSYTGTTAYWMHALDFGPKNVFISSAATVNLNNSASEDNPRTRISTTYQGGLSDRGPNTGTRGFGDHHTSGGTYFAYGRHPESGNNCGFREDTNGASNGYLWVK
Physico‐chemical
properties
protein length:297 AA
molecular weight: 32438,11790 Da
isoelectric point:6,48939
aromaticity:0,10101
hydropathy:-0,61919

Domains

Domains [InterPro]
IPR014716
Unmapped
56–186
IPR014716
IPR036056
STR
107–149
IPR036056 DC_0434
IPR036056
STR
107–155
IPR036056
NF040941
Unmapped
115–146
NF040941
ADO98427.1
1 297
Architecture
STR
STR 107-297
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADO98427.1
1 297
Domain Start End Length (AA) Confidence
N-terminal 1 197 197 0,0010
Central domain 198 286 90 0,1087
C-terminal 287 297 10 0,9811
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-197
Central
198-286
C-terminal
287-297

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-RSM4
[NCBI] 		444862 Uroviricota > Caudoviricetes > Pantevenvirales > Thaumasvirus > Thaumasvirus stim4
Host Prochlorococcus marinus str. MIT 9303
[NCBI] 		59922 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO98427.1 [NCBI]
Genbank nucleotide accession
GU071099 [NCBI]
CDS location
range 30876 -> 31769
strand +
CDS
ATGAAACTCAACGTTGGGGAAATAAGAGGATTACTAGCAAACAGTTATAATATAACTGTTCCTTCAGAGACTTCAATTAGTTTTGAAACTGGAGCTCAATTAACGCATACTACTTTAGGAACCAGTCACATGGTAGTTCCTTATGGCACTACTACAGAGTGGGATAATCAAGTAAGAGTTCATCAAAAAGATTTTTTGAATGGACAAATGCGATGGAATACAACAGACCAACAACTCCAATTTTATTACAATGGTTGGATGAATATGGTGTCTGGTATTGCTGTAGGAGATATCGGAAGTCAAACAAACCCTGCAGTAGATGGAAATGCAATATATAGAGCAGGTAAATCAAGTGGTATATATTGGATTCAACCAGAGGGGCAGTCAGCATATCAAATGTATGTTAATAATGATGATAATGGAGGTGGTTGGGTATTATGTGTTCATGCAAGGACATCAACCTGTCAAGATCATATGACTACAGGATCAGTCAGAATTAGCGGAACTACAGGTCCTAGAACAAATAATACATCTACAACTAAGATGGCGGACAGTTGGATTCAAGCATTACGCAATAGTTCCAGTTATACTGGCACTACTGCATATTGGATGCACGCATTAGATTTCGGTCCTAAGAACGTTTTTATTTCAAGTGCAGCAACTGTAAATTTGAATAATAGTGCTTCTGAAGATAATCCTAGAACTAGAATCTCTACTACATATCAAGGGGGTCTCTCTGACAGAGGTCCTAATACAGGAACTAGAGGTTTCGGAGATCACCATACTTCTGGTGGAACATATTTTGCATACGGTAGACACCCTGAGTCAGGTAACAACTGTGGATTCAGAGAAGATACTAACGGTGCATCAAACGGATACTTATGGGTAAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73a7cc99e19970a3d9a873c3fe003780fcf6bc7adf346409d7d4d7ef0c444ca3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5986
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage 9303-10a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank