Protein

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Genbank accession
YP_001468801.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MGVLGANVDRQIITPRLEALMNLKKLSKYQGMLALQTTSVSGLTATFGYSYGHIQGFYFEIEDGTTMTIPANSTGYICVRLDLSLTNTATGSITDGSYKVVTNQMQLLRVTKANLKKDVIHSGGVLQGTQRDLVLYSYTSNATTVTLTSFRNNWIYDGGPMNPVRSFGSGYSNNAGNTIKAYIRANRIYFDGAIKLRSGARNNDIMFNLDYGIEPLTSYRRAFGTTFQSNSTTQNAVVYVRPNGQVTLQAYATSGGNIMDLNALNWDLGNDDSYFYPT
Physico‐chemical
properties
protein length:278 AA
molecular weight: 30557,01470 Da
isoelectric point:9,15827
aromaticity:0,10791
hydropathy:-0,23813

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
2–156
G3DSA:2.60.520.10
DC_1902
RBD
126–277
DC_1902
YP_001468801.1
1 278
Architecture
STR
RBD
STR 2-156 | RBD 157-277 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_001468801.1
1 278
Domain Start End Length (AA) Confidence
N-terminal 1 131 131 0,8279
Central domain 132 267 137 0,0012
C-terminal 268 278 10 0,9947
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-131
Central
132-267
C-terminal
268-278

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage P35
[NCBI] 		330398 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001468801.1 [NCBI]
Genbank nucleotide accession
NC_009814 [NCBI]
CDS location
range 14459 -> 15295
strand +
CDS
ATGGGAGTTTTAGGCGCAAACGTTGATAGACAGATTATTACCCCTCGTCTTGAAGCACTAATGAATTTGAAAAAACTATCTAAATACCAAGGTATGTTAGCATTACAAACAACGTCCGTTTCTGGGTTAACCGCAACCTTTGGTTATAGCTACGGTCACATTCAAGGGTTCTATTTTGAAATCGAGGACGGAACCACTATGACCATCCCGGCTAACAGTACTGGGTATATCTGTGTTCGACTTGACTTATCTCTGACCAACACAGCAACAGGTTCCATCACTGACGGGTCATATAAGGTCGTAACGAATCAAATGCAACTACTACGAGTAACAAAAGCCAACCTGAAAAAGGATGTTATCCATTCGGGTGGTGTACTACAAGGTACCCAACGGGACTTAGTTCTTTACTCATACACATCCAACGCAACTACAGTGACACTTACGTCTTTCCGTAACAACTGGATATACGACGGTGGTCCAATGAATCCTGTTAGGTCTTTTGGTAGTGGGTATAGTAACAATGCAGGTAATACGATTAAGGCGTACATCCGTGCTAATCGTATATATTTTGACGGTGCCATCAAATTACGAAGTGGTGCGAGAAATAATGACATCATGTTCAACTTAGACTATGGCATTGAACCACTGACATCTTATCGCAGAGCTTTTGGGACAACTTTCCAATCTAACTCGACTACTCAAAACGCAGTCGTTTATGTTAGACCTAATGGACAAGTGACCTTACAAGCTTACGCAACATCAGGCGGAAACATCATGGACTTAAATGCCCTGAACTGGGACTTAGGAAACGACGACTCATATTTCTATCCTACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8069cce922720a9db95e651588314579f3f335c2be711f2e4e40b07be1a4ff2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7765
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages of Listeria monocytogenes Dorscht,J., Zimmer,M. and Loessner,M.J. 2009-12 — GenBank