Protein

View in Explore
Genbank accession
URQ03192.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYERLKREGDWLLIFRHDSTGGVFFTSDAEARSVGTDPDIEAKFSALNSLEEFRREDGKFQFKLHYPEVGITNIWKQSNNFAAKGVGQYLTNGNLAGGQFVTEQTTKTGSWVVVEKENPGSSKYVVEQPTAAVKDQIVFSVPQTRLLPNRTYTMSCWVGYEVDTDHDTAALFHSRWYDGASNPYTLGHIPGDVFESAGNERIVDGILWKRHYARFTTPSTLSTSNMYWYCGYTSDVAKLPTGKRWLTNFMISDAPLIKNYTGDYDARTGGVRGYEAISIQSDVQYWGGIEYNTGSNSLADGSVNHSNWYYAIGAQAASGGSTPGPGQTVNVTELWIYAPVGSRVGEYELAARHIREFSNNNYRLVATGVANGSSNLASCYLNDVSLFTPETKQAYQIRLLIMNDDLTVKTSSKYLLSSSTERGNFVNALNNLTNEIFIIVSNGSMYGDAAVDAAINQYNPVEYRGSSYFSQYSYSYAAFGRADLGIVYDRCIFDHPSDGDSIVDTAFEDKDGIGSAGFGNALLARDMVPVDTRYNLSDFGVVEGQYLIYKVRACIDRTTAIGGGTKSCNLRMYNAVNTEVARQNIFFGSAELFETQEFFVQVPAGAVTFGVWSDLDQEYFDYALVYKGGFAVPSGTPHLISNINGLAAQDIVNSPISGNVVNDTSWFNAYNSNSNLYENVNMPVRETDNVHWGNYVLSNGEKCFTRSTGTQTMIEMSEINIDPTRPYFLSLWVNSIDKDAGYLHFSCRVKDGADAFSTLRLADGTDASTFATIDRVDNFPAANGKWILMQAFILPHTWTDAQHQAFQDKYENYFGVYNPEDDPSSLTAKGVGSYTTNAVSFYRWKSDHAKMFLRYRDEGSVTESQTMWALPIVSEVKVACFYEDTITAIDYAMQ
Physico‐chemical
properties
protein length:894 AA
molecular weight: 99452,01280 Da
isoelectric point:4,88494
aromaticity:0,13087
hydropathy:-0,32987

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URQ03192.1
1 894
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,8887
Central domain 28 241 215 0,3877
C-terminal 242 894 652 0,4072
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-241
C-terminal
242-894

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PVA8
[NCBI] 		2938951 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URQ03192.1 [NCBI]
Genbank nucleotide accession
ON190024 [NCBI]
CDS location
range 136699 -> 139383
strand -
CDS
ATGTACGAAAGACTTAAACGTGAAGGCGATTGGTTACTAATCTTTCGCCATGATTCTACAGGAGGTGTATTTTTCACCTCCGATGCTGAGGCTAGAAGTGTCGGGACGGATCCCGACATTGAAGCCAAATTCAGTGCGTTAAACTCACTTGAAGAATTTCGTCGTGAGGACGGTAAATTTCAATTCAAGCTGCATTACCCTGAAGTCGGCATCACGAATATTTGGAAACAAAGTAACAACTTCGCAGCGAAAGGCGTAGGTCAGTATCTGACAAACGGTAACTTGGCTGGAGGTCAATTTGTTACCGAACAAACGACAAAAACAGGCTCATGGGTCGTTGTTGAAAAAGAAAACCCAGGGTCATCAAAATACGTTGTCGAGCAGCCAACTGCGGCGGTCAAAGATCAAATTGTGTTTTCAGTTCCACAAACCCGACTTCTTCCGAATCGAACATACACAATGTCATGTTGGGTTGGATATGAAGTCGATACTGATCATGATACCGCAGCTCTGTTTCATTCTCGCTGGTATGACGGTGCATCAAACCCATATACACTAGGTCACATCCCGGGTGATGTGTTTGAGTCAGCCGGCAATGAACGCATAGTTGATGGAATTCTATGGAAGCGTCATTATGCTCGTTTCACGACGCCTAGTACTCTGTCAACAAGTAATATGTACTGGTATTGTGGGTATACGTCAGATGTTGCTAAACTACCAACTGGAAAACGTTGGTTGACTAACTTCATGATTTCCGATGCTCCGTTGATTAAAAACTACACAGGGGATTATGATGCTCGTACTGGTGGGGTTCGTGGCTACGAAGCGATTTCAATCCAATCTGACGTTCAGTATTGGGGTGGTATTGAGTACAACACAGGCTCAAACTCACTTGCTGATGGGTCAGTGAATCACTCAAACTGGTATTATGCAATCGGTGCGCAAGCTGCGTCGGGCGGCTCTACGCCAGGTCCCGGACAAACAGTCAATGTAACTGAATTGTGGATCTATGCGCCTGTAGGATCACGAGTAGGTGAATATGAACTTGCGGCTAGACACATTCGCGAGTTCTCGAATAACAATTATCGTCTAGTTGCTACTGGTGTTGCAAACGGTAGTTCGAATCTAGCATCATGCTATTTGAATGATGTTAGTCTATTCACGCCCGAAACTAAACAAGCATATCAAATTCGTCTTCTGATTATGAATGATGATTTGACAGTGAAAACAAGCAGCAAGTATCTTTTGAGTAGTTCAACTGAACGCGGAAACTTCGTCAATGCATTGAATAACCTGACGAATGAAATCTTCATCATCGTCTCTAACGGTTCGATGTACGGCGATGCGGCGGTTGATGCTGCAATTAATCAATACAATCCCGTCGAGTATAGAGGAAGTTCGTACTTCAGCCAATACAGCTACAGTTATGCGGCGTTCGGTCGTGCTGATTTAGGTATTGTATATGATCGATGTATATTCGACCACCCGTCTGACGGCGACAGCATTGTTGATACTGCATTCGAAGACAAAGATGGAATCGGTTCAGCAGGATTCGGAAACGCGCTTCTGGCACGTGATATGGTACCCGTTGATACTCGATACAATCTATCTGACTTCGGTGTTGTTGAAGGTCAATACCTGATCTACAAAGTAAGAGCGTGTATTGATAGAACTACTGCTATCGGTGGCGGTACGAAATCGTGTAACCTGAGAATGTACAATGCAGTGAACACTGAAGTTGCAAGGCAGAATATTTTCTTCGGGTCAGCGGAATTATTCGAAACTCAAGAGTTTTTTGTTCAAGTCCCAGCAGGTGCAGTTACATTTGGCGTGTGGTCAGATCTTGACCAAGAGTACTTCGATTATGCACTCGTTTACAAAGGCGGGTTTGCAGTTCCTAGCGGAACTCCTCATTTGATTTCGAATATAAATGGTCTAGCTGCTCAAGATATTGTAAATTCACCAATATCAGGCAACGTAGTGAATGACACAAGCTGGTTTAATGCATACAACTCGAACTCGAATCTATACGAGAATGTCAATATGCCAGTCAGAGAAACAGATAACGTTCATTGGGGGAATTATGTTCTTTCGAATGGCGAGAAGTGTTTCACACGCTCTACAGGCACACAAACAATGATTGAAATGTCTGAAATCAATATTGACCCGACAAGACCATACTTCTTGTCATTGTGGGTAAACTCAATTGATAAAGACGCGGGTTATTTACACTTTAGTTGTCGAGTCAAAGATGGCGCTGATGCGTTTAGCACATTGAGATTAGCTGATGGGACAGATGCTTCAACATTTGCAACGATTGATCGTGTTGATAACTTCCCAGCCGCTAACGGAAAATGGATTCTGATGCAAGCATTCATTCTACCGCATACGTGGACAGATGCTCAACATCAAGCGTTCCAAGACAAGTATGAAAACTACTTCGGCGTTTACAACCCTGAAGATGATCCGAGTAGCTTAACAGCAAAAGGCGTTGGCTCATACACAACGAACGCAGTTAGCTTCTATAGATGGAAATCAGACCACGCCAAGATGTTCTTGCGCTATCGTGATGAGGGATCTGTAACTGAAAGTCAGACAATGTGGGCTTTGCCTATCGTGTCTGAAGTCAAAGTTGCTTGTTTCTATGAAGACACAATCACTGCGATTGATTACGCAATGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
792fa50f8e7f01bc0fc326758ae4822cb879f12c6ca366899e3420092b8864f3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2770
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a broad-host-range bacteriophage that prevents Vibrio alginolyticus infections in juvenile turbots farming He,Z. 2023-05-12 — GenBank