Protein

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Genbank accession
YP_010094126.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MAKMMASFGQGFVQTQVLSENNSVKYKLAFAAGVAQSTPSNAYYTFQDVPVGTQDDGPGINLREFNPATNQMLNFKTFNIQPQDNNASTKALVNYLTTLPASDNLLIFTSYGRLYSSPSVEAMMKSFGSVIWPSIFLTTNYGCNYCALYSIRRRKIIAENITYSDFKKENRDIRPALEFIYDKANDIGATGYSQKAIDDSATYVIDKDNTAKRFPQEFEQISPISDYGIAPNDKMQWNFEVKGDASLNVTGQSIRVNLRWFQGTSYISGSVVETQPMDADKWMWHQRYVTVPANADGFTIIASRYPEVADSEGSGAIREMMLTQVSRAVEPLMDPAGFGVNGIRMNNMISDGVDPNTLLVLPDTEDDKSGNIYSADFREYND
Physico‐chemical
properties
protein length:382 AA
molecular weight: 42610,20650 Da
isoelectric point:4,76842
aromaticity:0,11257
hydropathy:-0,38194

Domains

Domains [InterPro]
DC_0912
STR
1–382
DC_0912
PS52031
LEC
22–196
PS52031
YP_010094126.1
1 382
Architecture
STR
STR 1-382
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010094126.1
1 382
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,6916
Central domain 143 371 230 0,3867
C-terminal 372 382 10 0,2038
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-371
C-terminal
372-382

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage myPSH1140
[NCBI] 		2108137 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Karamvirus
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010094126.1 [NCBI]
Genbank nucleotide accession
NC_055739 [NCBI]
CDS location
range 160352 -> 161500
strand +
CDS
ATGGCTAAAATGATGGCGAGTTTTGGACAAGGATTTGTCCAAACTCAAGTTCTCTCAGAGAACAATTCCGTCAAGTATAAATTAGCTTTCGCAGCAGGGGTAGCTCAGTCTACCCCTTCAAATGCTTATTATACTTTTCAGGATGTACCCGTAGGCACACAGGATGACGGACCTGGAATTAACCTACGAGAATTTAATCCAGCCACAAATCAGATGTTAAATTTCAAAACGTTTAACATTCAACCACAAGATAACAATGCATCTACAAAAGCACTTGTTAACTACTTAACGACTCTTCCAGCTTCTGACAACTTGCTAATTTTCACTTCATATGGAAGATTGTATTCAAGTCCTTCTGTTGAAGCTATGATGAAGTCATTTGGCTCAGTCATCTGGCCAAGCATATTTTTGACTACTAACTATGGATGCAATTACTGTGCGTTGTATTCTATTCGCAGAAGAAAAATAATTGCAGAAAATATAACTTATTCTGATTTCAAAAAAGAGAACAGAGATATTCGTCCAGCTTTAGAATTCATTTATGATAAAGCCAATGATATTGGAGCTACTGGGTATTCTCAAAAAGCAATTGATGATTCTGCTACATACGTCATTGATAAGGACAATACTGCTAAAAGATTCCCGCAAGAGTTTGAGCAAATATCTCCGATAAGTGATTATGGAATTGCTCCTAATGACAAAATGCAATGGAACTTTGAAGTTAAAGGTGATGCTTCTTTAAATGTCACAGGACAAAGCATAAGAGTAAATTTAAGATGGTTCCAAGGTACATCTTATATTTCAGGATCAGTTGTTGAAACTCAACCTATGGATGCTGATAAATGGATGTGGCATCAGAGATATGTAACTGTTCCAGCTAATGCCGATGGATTTACAATAATTGCTTCTCGTTATCCAGAAGTCGCTGATTCAGAAGGGAGCGGTGCTATTCGCGAAATGATGCTAACTCAAGTATCAAGAGCTGTAGAACCTCTTATGGACCCTGCTGGATTTGGTGTAAACGGAATTAGAATGAACAACATGATTTCTGATGGCGTTGACCCTAACACTCTGTTAGTTCTTCCTGATACGGAAGATGACAAATCTGGTAATATCTACTCAGCTGATTTCAGAGAGTATAATGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1e0ad4005b2fb1791c6ce7298ea96bf2846007312e9ce47c7d04490c5e515286
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6417
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and genome analysis of lytic bacteriophages against Enterobacter cloacae Ramesh,N., Prasanth,M., Tamhankar,A.J. and Lundborg,C.S. 2018-06-21 — GenBank