Protein

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Genbank accession
AEG42329.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,72
TSP
Evidence RBPdetect2
Probability 0,54
Protein sequence
MGTIPSYPQIGALDNNSLFPVDSGIQTFKTTGAQLKTFMTAQIEVVLNQMKRDFYLQGLSAFTERTEMKDASSVVASIAIPFVAGSPDYPVLAFYAQTSTPNSRIWYWTGAIWDWVGLPLHGNYGSVNFRDPDTGTWIRTGNMNGSPYTAKVIRSPTGYSAFTSADLPLTGSNAFNQWSAGAANDDGLCMLLAWNQDDTQGFATSINGGASWTKQTRPAAFERVQSDGLKWGNGTWVAMTNNMDPGVANYINEPYYSQDDGVTWTKCTYPAQTDYDYSTGKLWFVNGRFYWSHPYCLLTSVDGVTWVETDYKNQNMGAWINSLIYHEPTGLLIIMGTNTATSWVRFSYDGLNWTTSNFVMQNYLREIIYADGKFAAYVNYEATKPFYIWDTPKIANIPLPGL
Physico‐chemical
properties
protein length:402 AA
molecular weight: 44843,59780 Da
isoelectric point:4,82213
aromaticity:0,14925
hydropathy:-0,27363

Domains

Domains [InterPro]
IPR036278
STR
110–373
IPR036278
DC_2179
STR
121–397
DC_2179
AEG42329.1
1 402
Architecture
STR
STR 110-397 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AEG42329.1
1 402
Domain Start End Length (AA) Confidence
N-terminal 1 61 61 0,9854
Central domain 62 273 213 0,6687
C-terminal 274 402 128 0,3612
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-61
Central
62-273
C-terminal
274-402

Taxonomy

  Name Taxonomy ID Lineage
Phage Bdellovibrio phage phi1402
[NCBI] 		1035662 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bdellovibrio bacteriovorus
[NCBI] 		959 cellular organisms > Bacteria > Pseudomonadati > Bdellovibrionota > Bdellovibrionia > Bdellovibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEG42329.1 [NCBI]
Genbank nucleotide accession
JF344709 [NCBI]
CDS location
range 17666 -> 18874
strand +
CDS
GTGGGCACTATTCCAAGTTATCCGCAAATTGGAGCTTTAGATAATAACAGTCTTTTTCCGGTAGACTCCGGCATTCAGACCTTCAAGACGACTGGGGCTCAACTTAAAACTTTCATGACGGCCCAAATTGAAGTCGTCTTAAATCAAATGAAGCGGGACTTCTATTTGCAGGGCCTAAGCGCCTTTACCGAAAGAACCGAAATGAAAGATGCCTCAAGCGTTGTGGCGTCAATTGCCATTCCTTTTGTGGCAGGCTCCCCCGACTATCCCGTTCTTGCATTCTATGCCCAGACCTCAACTCCAAATTCCCGCATTTGGTATTGGACTGGGGCTATTTGGGACTGGGTGGGGCTCCCTCTGCATGGCAATTATGGCTCTGTTAATTTCAGGGACCCGGACACTGGGACATGGATTAGGACCGGGAATATGAACGGCTCCCCATATACTGCAAAGGTCATTCGCTCCCCGACTGGATACTCTGCATTTACTTCGGCAGACCTTCCTTTGACGGGCTCTAATGCATTCAATCAATGGTCTGCGGGCGCAGCAAATGACGATGGCCTCTGTATGCTTTTGGCCTGGAATCAGGACGACACCCAAGGCTTTGCCACCTCTATCAATGGCGGGGCATCTTGGACCAAGCAGACGCGCCCAGCGGCATTCGAGCGGGTGCAGTCCGACGGCCTGAAATGGGGCAATGGGACTTGGGTTGCCATGACCAATAACATGGACCCAGGGGTGGCAAATTATATCAATGAGCCGTATTACTCCCAAGATGACGGCGTCACCTGGACCAAATGCACCTACCCGGCTCAGACTGATTACGACTACAGCACCGGGAAACTCTGGTTTGTGAATGGTCGCTTTTATTGGTCTCATCCTTATTGTCTTTTGACCTCCGTGGACGGGGTGACGTGGGTTGAGACTGACTACAAAAACCAAAACATGGGCGCATGGATTAACTCGCTGATATACCATGAGCCTACGGGTCTTTTGATTATCATGGGAACAAACACGGCCACGTCCTGGGTGCGCTTTTCTTATGACGGCCTGAACTGGACGACGTCCAATTTCGTCATGCAGAACTACCTACGTGAAATCATCTATGCCGACGGCAAATTTGCGGCATACGTGAACTATGAGGCGACAAAGCCGTTTTACATTTGGGACACCCCTAAAATTGCAAACATCCCTCTGCCAGGGCTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
7e4f6d148d0bcc3f35f6a76172785bbf3168fb990e3b011c3db72077d4cd0d10
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7550
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Morphology and genome sequence of phage phi1402: A dwarf myovirus of the predatory bacterium Bdellovibrio bacteriovorus Ackermann,H.-W., Krisch,H.M. and Comeau,A.M. 2011 — GenBank