Protein

View in Explore
Genbank accession
XGT88899.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQDTKTIIQYPTGSDEYDIPFDYLSRKFVRVSLVSDTQRLLLDNITDYRYVSRTRVKLLVSTDGYSRVEIRRFTSASEMVVDFSDGSVLRATDLNVSALQSAHIAEEARDLFSTSLSIGQLSYFDAKGLQIKNVAQGVDNTDAATVQQLNKIIADVVTTIPDSVADNIRGLWARVLGDIGITLVDGSFESGAAITTRTQALWSISGRKCYTWAGTLPKVVPENSTPESTGGISETAWVDSSSKALGVLLAGPSGAARVGLKQGGTVQDAINWLTFDSFDIVKDGSKDVTADIMAACVVANDLGLDIKQNDGTYLVSGNPVWPVYNSLDLNGVTLKLAAGFSGYFALTQKDSTTVYGPTSPIVQAINAAGGRTAGSGVLEGLVNSTELNGKFLFMEGADVLYYSRGTAKYWWANTYLSNRGKLSDNLKYGVSAITKITAVTPRTKIVYYRLPNLDFGNGPANNGVIRVLNNTRFIMQGGSISNRPLKDVSKSPVIISLNYCAAFKAYDFFDPYPAFAVDANNSLVYSYTLNFNDIADAVFENFNSQGYGWGVVGGQRSTNITYRDCNLNRVDMHDPYMGYLKVLDTRLGTWGINASGMGDMYLERVTVDLDDSAHGGYREHEGIINARGDFGGFHDGGLYIKDLTIVGEASAFEAASGHPVALVSAYSFNASLAYIPESSPVTPWGFKEVIVEGLHCPFKRTGRRFNSIISAPSIQFTVYHPMRVKLEDCNFNSTAFEKFDLRGWRVTPYNPSKVGIANTLAFRPTNFVDVKDCSMVGLEFTRPLSSYDYSNFDVNLVNVKNVEEHSLSPFTLYTNQCGRYNLVGCGLQQIVDKSMTTGERANRRSTFSVTGGTWNSLSGNPTDITYGNGYDIPVVATGVMFVGPYSQTEVTGANLNVAEFVQASGCKFLSSGPTYIQPLLWSGAGGPTGASANFNVARGNTLGLNISAVNGETSQVIAATLVIPQGFSTGPASGTTYGFAVEKNINYQLGLNARSLKANVGLVRCSDTITGVYLNA
Physico‐chemical
properties
protein length:1017 AA
molecular weight: 109953,15880 Da
isoelectric point:5,53103
aromaticity:0,10324
hydropathy:-0,09292

Domains

Domains [InterPro]
DC_0778
STR
1–677
DC_0778 DC_1183
IPR005604
ATT
14–126
IPR005604 G3DSA:2.10.10.80
IPR040775
RBD
187–241
IPR040775
XGT88899.1
1 1017
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 1-13 | ATT 14-126 | STR 127-181 | ATT 182-241 | STR 242-677 | RBD 698-997 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XGT88899.1
1 1017
Domain Start End Length (AA) Confidence
N-terminal 1 289 289 0,9944
Central domain 290 918 630 0,9945
C-terminal 919 1017 98 0,9445
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-289
Central
290-918
C-terminal
919-1017

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpP_GP-2
[NCBI] 		3146125 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XGT88899.1 [NCBI]
Genbank nucleotide accession
PP454753.1 [NCBI]
CDS location
range 34178 -> 37231
strand +
CDS
ATGGACCAAGATACTAAAACAATTATCCAGTACCCCACAGGTAGCGACGAATACGATATCCCCTTCGACTACCTGTCTCGTAAGTTTGTCCGTGTGTCTCTCGTGTCGGACACCCAGCGTCTCTTACTGGATAACATCACAGATTACCGGTACGTCTCCAGAACGCGCGTTAAACTGCTGGTAAGTACCGATGGGTATAGCCGTGTAGAGATTCGACGATTCACGTCAGCATCCGAGATGGTCGTGGACTTCAGTGATGGGTCCGTTCTCAGAGCGACAGACCTCAACGTGTCCGCTCTACAGTCTGCGCACATCGCAGAGGAGGCTCGTGACTTATTCAGCACATCTCTGAGCATTGGCCAACTTAGTTATTTTGACGCTAAAGGTTTACAGATAAAGAACGTAGCACAGGGTGTTGATAATACCGATGCAGCAACCGTTCAGCAGCTCAACAAGATAATCGCTGACGTTGTGACAACCATCCCTGACAGTGTGGCAGATAACATCCGGGGCCTTTGGGCAAGAGTTCTTGGCGACATCGGAATCACGCTTGTCGACGGTAGCTTCGAGTCCGGTGCGGCCATCACCACCAGAACCCAAGCGCTGTGGTCCATAAGTGGCCGTAAGTGTTACACATGGGCTGGTACTCTGCCGAAGGTTGTCCCTGAGAACTCTACTCCAGAGTCTACGGGCGGTATTTCCGAAACGGCGTGGGTGGATAGTTCCTCCAAGGCCCTCGGTGTACTTTTGGCTGGACCATCGGGAGCTGCACGCGTCGGTCTCAAGCAGGGCGGTACCGTTCAGGACGCTATTAATTGGCTCACGTTCGACTCCTTCGACATCGTTAAGGATGGTTCAAAAGATGTCACGGCAGATATTATGGCAGCCTGCGTTGTAGCAAACGACCTCGGGCTGGACATTAAGCAGAACGATGGGACATACCTAGTGTCTGGGAACCCTGTGTGGCCTGTGTACAACTCCCTTGACCTCAACGGGGTGACGCTGAAGTTGGCTGCGGGTTTCTCTGGATACTTCGCGCTGACCCAGAAGGACTCCACAACGGTTTACGGACCAACTAGTCCTATCGTTCAGGCCATCAATGCGGCTGGTGGTCGGACAGCTGGTTCAGGTGTTCTGGAAGGTCTGGTGAACTCTACCGAGCTGAATGGGAAGTTCCTGTTCATGGAGGGCGCTGATGTCCTTTACTACTCCCGAGGAACCGCTAAGTATTGGTGGGCGAACACCTACCTGTCAAACCGTGGGAAACTGAGTGACAACCTTAAGTATGGCGTATCGGCTATCACGAAGATAACCGCTGTTACCCCTCGCACAAAGATTGTCTACTACCGTCTGCCCAATCTGGACTTTGGTAATGGCCCCGCGAACAACGGTGTGATTCGTGTGCTGAACAACACCAGATTCATTATGCAAGGAGGTTCAATCTCCAACCGTCCGCTTAAGGATGTGTCAAAGAGTCCGGTCATAATAAGCCTCAACTACTGCGCAGCCTTCAAGGCGTACGACTTCTTCGACCCATATCCGGCCTTTGCGGTGGACGCCAATAACTCACTCGTCTACTCCTACACCCTGAACTTCAACGACATCGCTGACGCTGTGTTTGAGAACTTCAACTCGCAGGGGTACGGTTGGGGCGTTGTCGGTGGGCAGCGCTCTACCAATATAACCTATCGTGACTGTAACCTTAACAGGGTGGACATGCACGACCCGTACATGGGGTACCTGAAGGTGCTGGACACCCGCTTGGGTACTTGGGGTATCAACGCTTCAGGCATGGGTGATATGTACTTGGAGCGCGTCACGGTCGATTTGGACGATTCGGCACATGGTGGCTACCGAGAGCACGAGGGCATCATCAACGCCCGTGGTGACTTTGGCGGGTTCCACGATGGTGGTCTGTACATTAAGGACCTGACAATCGTCGGTGAGGCTTCCGCCTTCGAGGCAGCATCTGGACACCCAGTGGCGCTGGTCTCTGCATACTCCTTCAACGCATCCCTTGCGTATATCCCCGAGTCCTCTCCGGTTACGCCGTGGGGATTCAAGGAGGTAATCGTTGAGGGCCTGCACTGCCCGTTCAAGCGGACTGGTCGTCGGTTCAACTCTATCATCTCCGCCCCAAGTATTCAGTTCACTGTGTATCACCCAATGCGGGTTAAACTGGAGGACTGTAACTTCAACTCTACGGCGTTCGAGAAGTTCGACCTGAGGGGCTGGAGGGTTACTCCGTACAACCCTTCGAAGGTTGGTATCGCGAACACTCTGGCATTCCGTCCTACGAACTTTGTTGATGTGAAGGACTGCTCGATGGTTGGCCTTGAGTTCACACGGCCACTGAGCTCCTACGATTACTCTAACTTTGACGTAAACCTCGTTAACGTTAAGAACGTAGAGGAGCATTCCCTGTCACCGTTCACTCTGTACACTAACCAGTGTGGTCGTTATAACTTGGTTGGGTGCGGTCTGCAACAGATTGTGGACAAGTCGATGACCACAGGTGAGCGTGCGAACCGTCGTAGTACGTTCTCGGTGACTGGCGGTACTTGGAACTCGCTTTCCGGTAACCCTACGGATATAACCTACGGTAACGGCTATGACATCCCTGTGGTGGCGACTGGCGTTATGTTCGTTGGTCCGTACTCCCAGACTGAAGTGACAGGCGCAAACTTGAACGTTGCGGAGTTCGTTCAGGCATCCGGGTGCAAGTTCCTAAGCTCCGGCCCGACCTACATCCAGCCGTTACTCTGGAGTGGGGCAGGTGGTCCAACTGGAGCGAGTGCTAACTTCAACGTGGCACGCGGTAACACTCTGGGACTGAACATCTCCGCAGTGAATGGTGAGACGTCTCAGGTTATCGCCGCGACTCTGGTGATTCCGCAAGGGTTCTCAACTGGCCCGGCTTCAGGCACAACCTACGGGTTCGCCGTGGAAAAGAACATCAACTACCAATTAGGGCTTAACGCCCGCAGCCTGAAGGCGAACGTTGGTTTAGTGCGTTGTAGCGATACCATAACCGGGGTGTACCTGAACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d3a79825d299c846f892a09c4d78d35bb1ddb1f00ec85895151b9536e7f4f65
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6460
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of four novel bacteriophages targeting multi-drug resistant Klebsiella pneumoniae strains of sequence type 147 and 307 Ponsecchi,G., Olimpieri,T., Poerio,N., Antonelli,A., Coppi,M., Di Lallo,G., Gentile,M., Paccagnini,E., Lupetti,P., Lubello,C., Rossolini,G.M., Fraziano,M. and D'Andrea,M.M. 2024 — GenBank