Protein

View in Explore
Genbank accession
QGZ18164.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGGIIKKIIKPIIKIIPKFISNPIVGIGVSLFLSWILRPKVPDIEDFGTNQFDDFERGILVNKQSNDANIPVIYGERLTGGVRVFMESSGDDNKYLYMAIVMSEGEINDIEEIRIDDKVVTFASSFSNGTEVEVSSSDSNFYKADPNVDGSSKESLIRVQPFYGTDTQSASSLLSTLSSWGSNHKLSGLCYLAIRFKWNQDAFAGIPRVQARIQGKKVRTYNSSLVEQSPSYQTNPAWCLLDYLTNTRYGKGLSTDEIDLQSFYDASGVAEAQVTPYSGGSNINIFDTNTALDTSRNILDNVRELLKGCRGYLPYNAGKYNLVIETTGSASITLTEDNIIGGYSLSTPTKNDRYNRVIVGFVNPDRNYQVDEAQFPPIDDSGLPTADQHATMKSADGGFLLEGRFSFSTLTSQYQAEEMAEVILRRSREALTLGINVDFNGYDLAIGDIVNITHSSLGFSAKPFRVLGITFNEDLTVALSLVEYQASHYTWATKTQASTIPATNLPNPFTVQAPAISVSDELFELFDGSVVSKIIVTITSTDSFVNDFEVEYKESTTSNFRLMRRGSNKIVEKYPVKEGTIYDIRCRAINSIGAKSAFTTTQHEVNSAFTPPDDVQNYSIDVVGDKLHHTFDAVTNLDLDFYEIRFTSNTSETAYANTTVLVPRIGRPATSVTTPFVGTGKYFIKAVDKFGIRSTDFASQVISAQVIGDKVESVQTLTEHSAFTGTKSNVVAVSNNLQLDTSINFDSHTGNFDDALGLFDGGSGAIVSSGTYDFANAFDFNSVLKFNVLIDSFIVNNINFVNNFDSASGNFDARQGLFDGGQNASVDTNAILQISTSQDASTYTSFQDFKAGDFVARAVKFRLKMTSNNTQESPQVSALALKLSLPIRTEKGSNVSSGTDTAGKTITFGSEYYQTPSLTVIGQNMATGDFFTITSKGTASFVVEFFNSSGSTVDRTFDYQAIGIGQKQ
Physico‐chemical
properties
protein length:968 AA
molecular weight: 105844,54200 Da
isoelectric point:4,83475
aromaticity:0,10434
hydropathy:-0,19370

Domains

Domains [InterPro]
DC_0187
STR
2–959
DC_0187
IPR053171
Unmapped
231–371
IPR053171
QGZ18164.1
1 968
Architecture
STR
STR 2-959 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC111P
[NCBI] 		2686461 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ18164.1 [NCBI]
Genbank nucleotide accession
MN698245.1 [NCBI]
CDS location
range 21634 -> 24540
strand +
CDS
ATGGGTGGTATAATAAAAAAAATCATAAAACCAATTATTAAAATAATACCTAAGTTTATTTCAAATCCCATAGTTGGTATTGGTGTTAGTTTATTTTTAAGTTGGATTTTAAGACCCAAAGTTCCTGATATTGAAGATTTTGGAACTAACCAATTTGATGATTTTGAAAGAGGTATATTAGTTAATAAACAATCTAATGACGCAAATATTCCTGTTATTTATGGAGAAAGATTAACAGGTGGTGTTAGGGTTTTTATGGAATCTTCAGGAGATGATAATAAATATTTATATATGGCTATCGTTATGTCAGAGGGAGAAATAAACGATATAGAAGAAATTAGAATAGATGATAAAGTTGTTACTTTTGCATCTTCTTTTTCGAATGGAACAGAAGTTGAAGTAAGTAGCTCTGATTCTAATTTTTATAAAGCTGACCCAAATGTAGATGGCTCAAGTAAAGAAAGTTTAATAAGAGTACAACCTTTTTATGGAACTGATACACAATCAGCATCTAGTTTATTATCTACCTTATCATCATGGGGAAGCAATCACAAACTATCTGGCTTATGTTATCTTGCAATAAGGTTTAAATGGAATCAAGACGCATTTGCTGGAATACCAAGAGTACAAGCTAGAATACAAGGTAAAAAAGTTAGAACTTATAACTCTAGTTTAGTAGAACAATCTCCATCTTATCAAACTAATCCAGCATGGTGTTTATTAGATTACTTAACTAATACTAGATATGGAAAAGGATTATCAACAGACGAAATAGATTTACAAAGTTTTTATGATGCTTCAGGAGTTGCTGAGGCTCAAGTTACACCATATTCAGGTGGTAGTAATATAAATATTTTTGATACAAATACTGCTTTAGATACTTCAAGAAATATTTTAGATAATGTTAGAGAACTTTTAAAAGGTTGTAGAGGTTATCTTCCTTATAATGCTGGTAAATATAATCTAGTTATTGAAACAACAGGTAGTGCATCTATTACATTAACAGAAGATAATATAATAGGTGGTTACTCATTATCAACACCAACAAAAAATGACAGATATAATAGAGTTATAGTTGGTTTTGTTAATCCTGATCGTAATTACCAAGTAGATGAAGCACAGTTCCCACCAATAGATGATAGTGGATTACCCACAGCAGATCAACACGCAACAATGAAAAGTGCTGATGGTGGTTTTTTGCTAGAGGGTAGATTTTCATTCTCAACTTTAACATCACAATATCAAGCAGAAGAAATGGCAGAAGTAATACTTAGAAGAAGTAGAGAAGCATTAACTTTAGGAATTAATGTTGATTTTAATGGTTATGATTTAGCCATTGGAGATATAGTTAATATCACACATAGTTCGTTAGGATTTTCTGCTAAACCTTTTAGAGTTCTTGGAATTACTTTTAATGAAGATTTAACAGTAGCATTATCTTTAGTAGAATATCAAGCTAGTCATTATACTTGGGCAACTAAAACTCAAGCATCAACAATACCAGCTACTAATTTACCTAATCCTTTTACAGTACAAGCACCAGCAATATCAGTATCAGATGAATTGTTTGAACTATTTGATGGTTCAGTAGTTTCTAAAATAATTGTTACTATTACAAGTACAGATTCTTTTGTTAATGATTTTGAAGTTGAATACAAAGAATCTACTACATCTAATTTTAGATTAATGCGTAGAGGTTCAAATAAAATTGTAGAAAAATATCCTGTTAAAGAGGGTACAATTTATGACATAAGATGTAGAGCAATAAATTCTATTGGTGCTAAAAGTGCATTTACTACAACACAACACGAAGTTAATAGTGCATTTACTCCACCAGATGATGTTCAAAATTATTCAATAGATGTAGTTGGAGATAAATTACACCATACATTTGATGCTGTAACAAACCTTGATCTTGATTTTTATGAAATTAGATTTACTTCAAATACAAGTGAAACAGCTTATGCAAACACAACTGTATTAGTTCCAAGAATAGGACGACCAGCAACAAGTGTTACAACACCATTTGTAGGAACAGGAAAATATTTTATAAAAGCTGTAGATAAATTTGGAATAAGATCAACTGACTTTGCAAGTCAAGTTATATCGGCTCAAGTTATTGGAGATAAAGTTGAATCAGTGCAAACATTAACAGAACACTCTGCATTTACAGGAACTAAATCTAATGTAGTTGCAGTGTCTAATAATTTACAATTAGATACATCTATTAACTTTGATAGTCATACAGGAAATTTTGATGATGCACTCGGTCTTTTTGATGGTGGTTCAGGTGCAATAGTATCATCAGGAACTTATGATTTTGCAAATGCTTTTGATTTTAATTCTGTTTTAAAATTTAATGTTCTTATAGATTCATTTATTGTTAATAATATTAACTTTGTAAACAACTTTGATTCAGCAAGTGGAAATTTTGATGCAAGACAAGGGTTGTTTGATGGTGGTCAAAATGCGTCAGTAGATACTAATGCAATATTACAAATATCTACCTCTCAAGATGCCTCTACTTATACTTCATTCCAAGATTTTAAAGCTGGAGATTTTGTTGCAAGAGCAGTTAAATTTAGATTAAAAATGACTTCTAACAACACACAAGAAAGCCCTCAAGTTTCAGCTTTAGCACTTAAATTATCTCTACCTATAAGAACTGAAAAAGGTAGTAATGTTTCTAGTGGAACTGATACTGCTGGAAAAACTATTACTTTTGGTTCAGAGTATTATCAAACTCCATCACTAACTGTTATAGGTCAAAACATGGCTACAGGAGATTTCTTTACAATTACATCAAAAGGAACTGCATCTTTCGTAGTTGAATTTTTCAATAGTTCTGGTAGTACTGTTGATAGAACTTTCGATTATCAAGCAATCGGAATTGGACAAAAACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f33ec5e5631b8922d3f10255753f55a6021144a2a7d90ad90f279918f31d8937
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8575
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank