Protein

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Genbank accession
AUR82068.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
Protein sequence
MSTTRVNLDVTQYVKVADKQLSLLLQSHRDTVRIAFSDIKPARDNTVFHELGGDDEILEVTHTDTFVWALAMTSCSALTVTTNKSGVDSPVNRIILPEFQGEVITTVTQAVASAPGDRDITLVDSTGLVVGDRVTDLTAASDRKLPIIVAINGNVITLDRGLDLSYPIGKDWSSVPVELNVLGTPENPVIFSVAPPVNETWVITRLLLSMTHDIAGDLGLFGGIPALTYGVQVRTRDGVVNTLNNWKSNGDMALSMYDISFDSRSGGQGDYGTKGRFTFAKSGTVLELKGADSDSLEIVIQDDLTDLVSFEIMVQGHNKG
Physico‐chemical
properties
protein length:320 AA
molecular weight: 34496,54790 Da
isoelectric point:4,60176
aromaticity:0,05937
hydropathy:0,01625

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.021.A._10N.222.51.F9
[NCBI] 		1881415 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR82068.1 [NCBI]
Genbank nucleotide accession
MG592403.1 [NCBI]
CDS location
range 2958 -> 3920
strand +
CDS
ATGTCAACGACTCGTGTGAATCTCGATGTCACTCAGTATGTGAAGGTAGCTGATAAACAGTTGAGTCTGCTTTTGCAGTCACATCGTGACACTGTTCGTATTGCATTTAGTGACATCAAACCTGCACGAGATAACACGGTATTTCATGAACTCGGTGGAGATGATGAAATACTTGAAGTGACTCACACTGACACATTTGTGTGGGCGTTAGCCATGACATCATGTTCAGCGTTGACAGTGACGACTAATAAAAGTGGAGTAGATTCACCTGTTAATCGTATTATACTGCCAGAATTCCAAGGTGAGGTCATAACCACCGTCACGCAAGCAGTCGCTTCGGCACCAGGTGACAGAGACATCACGTTAGTAGATTCAACAGGTCTTGTTGTTGGTGACAGGGTTACCGATCTTACTGCTGCTAGTGATAGAAAGTTACCGATCATAGTCGCCATAAACGGTAACGTGATTACCCTTGACAGGGGTTTAGACCTTAGCTATCCGATTGGGAAAGATTGGAGCAGTGTACCTGTTGAACTTAATGTACTTGGTACACCTGAAAACCCTGTAATATTCTCAGTAGCACCCCCTGTAAATGAAACCTGGGTTATAACTAGACTACTGTTAAGTATGACACATGACATCGCTGGGGATTTAGGGTTGTTCGGTGGGATTCCCGCACTCACGTATGGTGTTCAGGTTAGAACTCGTGATGGTGTGGTTAATACATTAAACAACTGGAAATCAAACGGGGATATGGCACTTAGCATGTACGACATCAGCTTTGACTCAAGGTCAGGTGGACAGGGTGATTATGGTACAAAAGGAAGGTTTACCTTTGCAAAGAGTGGTACTGTGTTAGAGCTTAAAGGTGCTGACTCAGATAGTTTAGAGATAGTTATACAAGATGACTTAACCGACTTAGTAAGCTTCGAGATAATGGTACAAGGTCACAACAAGGGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2925d990bb5e8060819b39250f1e5a2031857a325646574cfdfa97609b6567c6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6791
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank