Protein

View in Explore
Genbank accession
QFP93995.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,51
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLKINNLDAIAPPLQDDDLLLVKMKRRANALGDEDRQASWAVVRNSLNLGQYMPTVGGTFTGTVTLANNVGLNSRATNGTARRLLQFGSNNRLAIGEVAVGMDIYAGDFPRFTKDGTNFYNVITTNNLPTPASLSDGGAYTKAQVDAIALTKANLSGAQFTGHVIINPDIPLRSFNTQGGSVNMITYQTNGVNVGDASTQMYLASGVVPLWYNGSTNFKIYSEGSKPTAAELGFYSSAQIDAKFDQKANLSGAQFTGHVGLNNNVALKGANSSGVLWNLMSRLPDNSTLVSDWAGITKIGSSQVPVWKTDSFGSTEWKFYTEGNKPTVAELGLTDTVNKASTALQQGSYGLGGVPQFLSDNGFLAVSNQTQFFSQTGASDQQRFGGRGNGVHIFYGLTTDQTQSLSSSLFVRDNAKVIAKWSTANASNGAPIQTLTNELYGTLNKPTAADVGAYSKAEADQTFAKQAGTGNPIPAGTNLSYYDANRSGIWYQDVPANATTELGYPTPNVACSIEVLPVRGDGSCFQIWRSSQHTAVFVRFINTSTTSPWRRVSSDSDQRVDTLSIQRDGAAVSLKALTNTGASYIEGLDATSSTLKWAIGKDSTGANDQIAFTASGKGYLVFTSSQDTSIASKWASNVGNQISLTKNGDIIYSASAGTSHDFNAILAVHANGEGVTVRPYSDDQPSIITGSSANGAATTWRIGKFSAGNDVNFASSVGQSIGFSTNGNIYHDAPNHLHIFNQGLLIEGSIANNGGFSSKKNGESITLQPQVSGGGAWLQVRDYIGTADCSVGMRPNENTAEFFNSKANSHLRLMPDGSFNAGSNGVSNLDVKSNGDVYARSRIFAGAASLGTDGNLGGTVWGTSGTAKGYIDSVGTTALNSSKTYTDQKLAAQNSKPLRKIWGKETGSYPQHFDAGFLPLPPDASHAVAANTTFGSGRSIRLDEPLWGKKLWSIHGDSYTGSVSDPRGFIRAWHCEVPDMSGVTSIDDSGNIREFTDFETQLGSGTWRFRMSTDGRTITHIASSGGTTPIYSLYVQDNV
Physico‐chemical
properties
protein length:1041 AA
molecular weight: 110421,55370 Da
isoelectric point:6,23032
aromaticity:0,09030
hydropathy:-0,31364

Domains

Domains [InterPro]
DC_0026
STR
1–281
DC_0026 DC_1909
DC_1142
STR
245–392
DC_1142 cd19958
QFP93995.1
1 1041
Architecture
STR
STR 1-640 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Wc4-1
[NCBI] 		2652429 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFP93995.1 [NCBI]
Genbank nucleotide accession
MN270892 [NCBI]
CDS location
range 46150 -> 49275
strand -
CDS
ATGGCAGATTTAAAAATTAACAATCTTGATGCAATCGCTCCACCGCTTCAGGATGATGACCTACTGCTTGTCAAGATGAAACGCCGTGCTAACGCATTGGGAGACGAAGACCGTCAAGCATCTTGGGCAGTGGTAAGAAACTCTCTTAACCTTGGACAGTACATGCCAACTGTTGGTGGTACTTTCACAGGAACTGTAACTCTGGCTAACAATGTTGGTCTGAACAGTCGTGCCACAAATGGTACAGCAAGACGCCTGCTACAGTTTGGTTCAAACAACCGTTTAGCTATCGGTGAGGTTGCTGTGGGCATGGATATCTATGCTGGTGACTTCCCACGCTTCACAAAAGACGGTACAAACTTCTACAACGTAATCACCACAAACAACCTGCCTACCCCTGCCTCACTATCTGATGGCGGTGCTTATACAAAAGCACAGGTTGATGCAATTGCTCTGACAAAAGCTAACCTGTCTGGTGCTCAGTTCACTGGTCATGTAATCATCAACCCTGACATTCCTCTGAGAAGCTTTAACACTCAGGGTGGCTCTGTCAACATGATTACCTATCAGACAAATGGGGTAAACGTTGGTGATGCTTCAACACAGATGTACCTTGCATCTGGTGTTGTCCCTCTATGGTACAACGGCTCAACTAACTTTAAGATTTACTCTGAAGGTAGCAAGCCAACCGCTGCTGAATTAGGTTTCTACTCAAGTGCACAGATTGATGCAAAATTTGACCAGAAAGCTAACCTGTCTGGTGCTCAGTTCACTGGTCATGTCGGTTTAAATAATAACGTTGCGCTGAAGGGTGCTAACTCATCTGGTGTCCTATGGAACCTTATGTCACGCCTGCCTGATAATTCAACACTTGTATCTGACTGGGCAGGAATCACAAAAATTGGCAGTTCTCAAGTTCCTGTGTGGAAGACTGATTCTTTTGGTTCAACAGAGTGGAAATTCTACACGGAAGGTAACAAACCAACAGTGGCTGAACTTGGGTTAACGGACACAGTGAACAAAGCTTCTACAGCTCTGCAACAAGGCTCTTACGGTCTTGGTGGTGTGCCTCAGTTCCTATCTGATAATGGATTCTTAGCGGTTTCTAACCAGACTCAGTTCTTCAGTCAGACTGGTGCATCTGACCAGCAGCGTTTCGGTGGTCGTGGTAATGGTGTTCACATCTTCTATGGCCTGACAACTGACCAGACACAATCACTGTCAAGTTCACTGTTTGTGCGTGACAATGCAAAGGTTATTGCGAAGTGGTCTACAGCAAATGCGTCTAACGGTGCTCCGATTCAGACCCTGACAAATGAGCTGTACGGTACACTGAACAAACCAACTGCTGCTGATGTTGGCGCTTACTCTAAAGCAGAAGCTGACCAGACATTTGCTAAGCAAGCTGGTACAGGTAACCCAATTCCAGCTGGTACAAACCTGTCTTACTATGATGCTAACAGGTCTGGTATCTGGTATCAAGACGTCCCTGCAAACGCAACTACTGAGCTGGGGTATCCAACACCTAACGTGGCGTGTTCTATTGAAGTCTTGCCAGTTCGTGGTGATGGCTCTTGCTTCCAGATTTGGAGAAGTAGCCAGCACACAGCAGTCTTTGTACGATTCATCAACACGTCTACAACCTCACCGTGGAGAAGAGTATCATCAGACTCTGACCAGAGAGTTGATACGTTATCTATCCAACGTGACGGTGCAGCAGTTAGTCTGAAAGCTCTGACCAATACAGGTGCTTCTTACATTGAAGGTCTTGATGCCACATCATCAACCCTGAAATGGGCGATTGGTAAAGATAGTACGGGGGCTAATGACCAGATTGCTTTCACAGCGTCAGGGAAAGGGTATCTTGTTTTCACATCTTCACAGGATACAAGCATCGCATCTAAGTGGGCTTCGAACGTTGGCAACCAGATTTCTCTTACTAAGAATGGTGATATCATTTACTCAGCAAGTGCCGGAACGTCACATGACTTCAACGCAATCCTTGCTGTTCACGCTAATGGTGAGGGGGTAACGGTCAGACCATATAGTGATGACCAGCCAAGTATCATTACTGGCTCATCTGCTAATGGTGCTGCGACCACTTGGAGAATTGGTAAATTCTCAGCAGGGAATGATGTTAACTTCGCAAGCTCTGTTGGTCAGTCTATTGGTTTCTCTACAAATGGTAATATATACCACGATGCACCTAACCATCTGCACATCTTTAATCAGGGATTGTTAATAGAGGGTTCTATTGCAAATAATGGTGGTTTCTCTTCGAAAAAGAACGGTGAGAGTATCACACTCCAGCCACAAGTTTCAGGTGGTGGTGCTTGGTTGCAGGTTAGAGATTACATCGGTACAGCAGACTGCTCTGTGGGTATGCGTCCTAATGAGAACACTGCTGAGTTCTTTAACAGCAAGGCGAACTCTCACCTGAGATTAATGCCTGATGGAAGCTTTAATGCTGGGAGTAATGGGGTTTCTAACCTTGACGTTAAGTCTAATGGTGATGTTTATGCAAGAAGTCGCATTTTTGCAGGTGCAGCATCACTAGGAACTGATGGGAATCTTGGTGGTACAGTTTGGGGTACATCTGGTACAGCCAAAGGTTATATTGATAGTGTTGGGACAACAGCTCTCAACTCATCGAAGACCTACACTGACCAGAAGCTTGCTGCACAAAACTCCAAACCTCTGCGTAAAATCTGGGGTAAAGAGACTGGAAGCTACCCACAGCACTTTGATGCAGGGTTCTTGCCTCTACCACCTGATGCGTCTCACGCTGTTGCTGCTAACACAACCTTTGGTAGTGGGCGAAGCATCAGACTGGATGAACCTCTTTGGGGTAAAAAACTGTGGTCTATACATGGTGATAGTTACACCGGCTCTGTTTCAGACCCAAGAGGATTTATTCGCGCATGGCACTGTGAAGTACCTGATATGTCTGGTGTTACAAGTATTGATGACTCAGGAAACATTAGAGAATTCACTGACTTTGAGACTCAGCTTGGTTCAGGTACATGGCGCTTCCGCATGAGTACAGACGGAAGAACAATCACCCACATTGCTTCTTCTGGCGGTACAACCCCAATCTACAGTCTTTACGTTCAGGATAACGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1cfa54f18246e312d1905eb9d6e34ec9a1b04ce5d20f6ce87b52751e0530d23e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5818
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Six bacteriophages against potato bacterial diseases Zhang,X. and Kering,K. 2022-08-30 — GenBank