Protein

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Genbank accession
YP_007518382.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MANNLSMPRFKAFGQDGKPLAFGRVYLYYPRTSEKKPGYTDSTANVELQNPVILDANGEAAIFLDGAYKIILRDKNDVLQWTVDNYNTDYFSSTNVSITPQANKVPLAGSTGVITPGWIDGLIAVYNDVAVSKGDIVLLKQKDAEHDTNISVLQTVTGDNADGITQLSIDVQNLKGASASLVKGYATLAALNADLVPEDGTLADVTNDPDTNNNGRYRKSGATGTGSWVKTNYSEWSTLWLEMNRLNDFVYDLAIYNYNKTQEELEIVPIVMDEANKMALGFYSDTGELWAAGIERIEATGKAVQPVVVNENGDIAIGIESETGQTMMDPHYSTIMYGVKKVGIFPDEFNVKDGYVYAIVDEDKKIAFGIKDDGSLVGSGLTFQTAPVEKGDKQSIDMEHNHFIFSGQSLSVGATGKPVISTSQPYDNLTFDGGPRSDLDELTGFKPLVEDENSPAPDGGTNRGETCCSGAANFTTHLIESEDGIAYDQQGYAIVSSTVGHGGYRIDQLYKGSAWYDYYTAHVQAGFDLSQAQGKTYAVQALGWIQGENDQFDNSKARLAYKNDLIQYQADIEADAQAITGQTHRVPLLTYQLACYVRQGYRNVTLAQLDCHKESQDIYLVTPMYHVPYATDAVHLTNLGYLWLGHYFGKVYKKVVFDGIEWEPVRPKTITQQGAVVLIDFFVPDPPLQLDTSTLGLATDYGFAAYDDSGDIDVLSVELVGQTRVKLTLASAPGAGGGIRYGLDYIGTGLTHNNGGSGNLRDSAPEYFTYAGTDYPLYNWCVMFDELI
Physico‐chemical
properties
protein length:788 AA
molecular weight: 86129,79160 Da
isoelectric point:4,51418
aromaticity:0,10533
hydropathy:-0,28680

Domains

Domains [InterPro]
DC_2149
ATT
85–230
DC_2149 DC_0547
SSF52266
STR
400–654
SSF52266
IPR036514
STR
402–660
IPR036514
IPR005181
ENZ
499–652
IPR005181
YP_007518382.1
1 788
Architecture
ATT
STR
ATT 85-230 | STR 270-776 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007518382.1
1 788
Domain Start End Length (AA) Confidence
N-terminal 1 698 698 0,7314
Central domain 699 777 80 0,3636
C-terminal 778 788 10 0,5428
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-698
Central
699-777
C-terminal
778-788

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VvAW1
[NCBI] 		1168281 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio vulnificus
[NCBI] 		672 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007518382.1 [NCBI]
Genbank nucleotide accession
NC_020488.1 [NCBI]
CDS location
range 36287 -> 38653
strand -
CDS
ATGGCTAACAATTTATCAATGCCTAGGTTTAAAGCGTTTGGTCAGGATGGTAAACCACTGGCCTTTGGTCGGGTGTACCTTTACTACCCAAGAACAAGCGAAAAGAAACCAGGTTACACAGACTCAACAGCTAATGTTGAGTTGCAAAATCCGGTGATCCTGGATGCGAATGGAGAGGCTGCAATATTCCTTGATGGCGCATACAAGATTATTCTTCGTGATAAAAACGATGTGCTTCAGTGGACGGTTGATAACTACAACACCGACTACTTTAGCTCGACAAATGTTTCAATCACGCCACAGGCAAACAAGGTTCCACTTGCAGGTTCAACTGGTGTTATTACACCTGGCTGGATAGATGGGCTTATCGCTGTTTACAACGATGTTGCAGTATCTAAAGGCGACATCGTTTTACTGAAACAAAAAGATGCTGAGCACGATACAAATATCAGTGTTTTGCAAACTGTAACCGGTGATAACGCGGATGGTATTACTCAGCTTTCCATTGATGTGCAAAATTTAAAAGGCGCCAGCGCCAGCTTGGTGAAAGGATATGCAACGCTTGCAGCCCTTAACGCTGATCTGGTTCCTGAAGATGGCACGCTTGCTGATGTAACGAATGATCCTGACACGAATAACAATGGCCGATACCGTAAATCAGGTGCCACTGGTACAGGTTCATGGGTTAAAACAAACTACAGCGAGTGGTCAACTCTATGGCTTGAAATGAACCGCCTGAATGACTTTGTTTATGATCTGGCTATCTACAATTACAACAAGACTCAAGAAGAACTTGAGATAGTGCCTATTGTTATGGATGAAGCAAATAAGATGGCGCTTGGGTTTTATTCTGACACTGGCGAGCTTTGGGCGGCAGGAATTGAGCGCATTGAGGCAACAGGAAAGGCGGTTCAGCCAGTTGTTGTCAATGAAAATGGTGATATTGCCATTGGCATTGAGTCAGAAACAGGCCAGACAATGATGGACCCGCATTACTCAACCATTATGTATGGTGTGAAAAAGGTCGGCATCTTCCCTGATGAGTTCAATGTTAAAGATGGTTATGTGTATGCCATTGTTGATGAGGATAAAAAAATAGCTTTTGGCATTAAGGATGATGGTTCGCTTGTTGGAAGTGGGCTCACATTCCAAACAGCGCCGGTTGAGAAAGGAGATAAGCAAAGCATTGATATGGAGCACAACCACTTTATTTTTAGTGGTCAATCTCTTTCGGTTGGCGCGACAGGTAAGCCGGTGATTAGCACTTCTCAGCCATACGACAACCTAACCTTTGATGGTGGACCAAGGTCTGATCTTGATGAGCTCACAGGATTCAAGCCGTTGGTGGAGGATGAAAATAGCCCGGCGCCAGATGGTGGTACAAACCGTGGTGAAACATGCTGTTCAGGTGCGGCAAACTTCACTACTCACCTTATCGAGTCTGAAGATGGTATTGCTTATGATCAGCAGGGTTATGCAATCGTTTCTTCCACAGTTGGTCATGGCGGGTACCGTATTGATCAGCTGTATAAGGGTAGTGCTTGGTATGACTACTACACGGCACACGTTCAGGCTGGTTTTGATTTATCACAGGCTCAAGGTAAAACCTATGCTGTCCAGGCGCTTGGGTGGATACAGGGCGAGAACGATCAGTTTGATAATTCAAAGGCAAGGCTGGCATACAAGAATGACTTAATTCAGTACCAAGCAGACATTGAGGCGGATGCGCAGGCGATCACCGGGCAAACTCACAGGGTTCCTTTGCTTACTTATCAGCTTGCCTGTTATGTTCGCCAGGGCTATAGAAATGTAACTCTTGCTCAGCTGGACTGTCATAAGGAAAGCCAGGACATTTACCTGGTTACGCCAATGTATCATGTGCCTTATGCTACTGATGCAGTTCACCTTACAAACCTTGGATACCTATGGCTTGGTCATTACTTTGGCAAGGTTTACAAAAAGGTAGTTTTTGATGGTATTGAGTGGGAGCCTGTAAGGCCAAAGACAATCACTCAACAGGGCGCAGTTGTTCTTATCGACTTCTTTGTTCCAGATCCACCATTGCAACTGGATACTTCAACGCTTGGCCTGGCCACCGATTATGGTTTTGCCGCTTATGACGATTCAGGTGATATTGATGTTTTGTCAGTGGAGCTTGTTGGGCAGACTCGCGTTAAGTTAACCCTGGCAAGTGCGCCAGGTGCAGGTGGCGGTATTCGATATGGTCTTGATTATATCGGTACCGGCTTAACTCACAATAACGGTGGCAGCGGAAACTTGCGTGACAGCGCACCAGAATACTTTACTTATGCAGGCACAGACTACCCATTGTATAACTGGTGTGTCATGTTTGATGAATTGATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d132f57725ff649fd44ea28a33429d329ce78116ba8026e8617230a6e1f50ac7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7750
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50