Protein

View in Explore
Genbank accession
QIQ67193.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSVMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGASTINVSGFGAKAIVGAANFPLTGGELGQGLIAELVFDATGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNNNRAKDFDYRFISEADGSMAFYSRQGSAGPTQDILFSRSNVTFLQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQIMRWDWASTNVIFNNRPLFAGQYVPWDSGNFDPADYQQHFGTDRNSQYHQQYRKYEHLGLQLHNCIVWKRNPSNLR
Physico‐chemical
properties
protein length:584 AA
molecular weight: 64264,88290 Da
isoelectric point:5,83801
aromaticity:0,11301
hydropathy:-0,37449

Domains

Domains [InterPro]
DC_0009
ATT
1–210
DC_0009
cd19958
STR
152–231
cd19958
DC_1788
STR
167–552
DC_1788
QIQ67193.1
1 584
Architecture
ATT
STR
ATT 1-210 | STR 211-552 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage steven
[NCBI] 		2719611 No lineage information
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIQ67193.1 [NCBI]
Genbank nucleotide accession
MT119370 [NCBI]
CDS location
range 30761 -> 32515
strand +
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATCCCGCAGACCTCTTCCACTGGTTTTGCCAACCTTCGCGATGGCTACACGCCGGACTACGAAATCAGTCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGGAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGACAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGCGTCGGAAATGACGGCATAATGCGGCGTTATCGCTCCATGGTGAATGCCAATGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCATGGTCGGTGATGCGCTCCAACATCCCGATGCCGGCCGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTTATCGCTTCTCAGAATGCCCCCGTATATCCGGCTTCCGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGACGGCATGATTCTTCGTGTCAAGTTCAACACCATGAACACCGGCGCCTCCACCATCAACGTCTCCGGATTTGGCGCCAAGGCCATCGTCGGCGCAGCGAACTTCCCGTTGACCGGCGGAGAACTCGGTCAAGGCCTCATCGCTGAGCTTGTATTCGACGCCACCGGCGACCGCTGGAGGATTCTCGCAGGCGCGCCACGCATCCAAGTAGGCAACGCCGATCAAGATTATCAGGCCCCAAGCTGGAAACAGGTGAAGGATTACGTCGCGTCCCAAAAGCTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCTATCCAAGACACTACGCCGTGGTTCGCCAATCTGGAGTTGTCTGACGCTCGGCCTTTCATCGATTTCCACTTCAACAACAACCGCGCCAAAGACTTCGACTATCGCTTTATCTCTGAAGCTGATGGGTCGATGGCGTTCTATTCTCGCCAGGGGTCCGCTGGTCCTACCCAGGATATCCTGTTCAGCAGGTCGAATGTTACATTCCTCCAGCCGCGACTGGATGTTGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACTGCCGATCAGCCTGGTTGGAAATTCACCTTCGCACAAGGCGTGGACGCCAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCTGACGGCTCTTATCGCTCGCAAATCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAATCGCCCTCTGTTTGCTGGACAATATGTCCCTTGGGACTCCGGAAACTTTGATCCGGCAGACTACCAACAACATTTCGGGACCGACCGGAATTCGCAATACCACCAGCAATACCGGAAATATGAACACCTGGGGCTCCAGCTCCACAACTGCATCGTATGGAAACGCAACCCTTCAAATCTTCGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
134ed6f6db28a44a5706d3470d1252507c9903df16dc1ff7b67f1c2be9c6efe8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7066
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank