Protein

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Genbank accession
XAO34402.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPYSYVLLSGNGSATNFGFSFGYLSKFHIGVKVNGVVTTFTWVTDFTIGITPAPANGAVIEVRRTTPLNQPIVDWSDGSTLTEADMDLNTRFSLYTAQEAADGVAASITQNSLGQWDGQNRRAVNFADPVDPQDLVNKRYFEDVYTPQLDAKVTEATNQANNAASSAATAQGYALAADNSADLAAALLATFKGQYLGALASNPTLDGNGQPVTAGDLYFSTTENLMKVYTGSAWINAGSTVQSTIKRPVTPIVATAGQTVFPVSGGYDAPYILVFVNGVEVASPDVDVTNGSTIVFSSGLTAGDKVDYAAFGAFQVANPIIDGTSAADFIKTRNARVVTSIADLKALNKNTYNFVLVTGFYASGDGGGGFFLQVPTMPTNGIVQVGNDGGIWQLVVDRDYVSAKQLGARLDGSTDDSSLLNNAKSTLDALGKRLYIPSGVCRISTAITPPKAGVFGDSPQASIIQCNNCSAFLFPANFGLSRPACVIEKLGIQSYSNTCDGLYAFRAPGVASGASPVYNSGLTVRDVEIGTGGRFGGGFSLKDFFRVNVENIGMTDVSSAVLLTGSVVQAVFRNVTANGDNAPTVLNRYGFQTAAASYSSGTLGPEHISTWDCSFIRYTRGVQHDAGLMVSFNNTDLETFTHGFYLSQPCTVRGGISAPAPAASGTAAWIGLFKAISDFDVANGTLIDDLEINTLNTPGTPASSYGILIGNNVNRCVGTTIRSPRIRGNTSSMVGGIVANLAGGDIVIEDAIINGSVVTGTTVSVNNASYARVVGNRSATGGTVNGSLSITDNGVGSIGDVRGNAFAAITNTLNAYSGTWTPGTIPNGTPAGTTVAVPGAVAGDKVVVGLSSLIGSAYCLISGYVSSTGNVTVLLYNVSGASQTIPSGTLQVTVLKS
Physico‐chemical
properties
protein length:897 AA
molecular weight: 92786,51370 Da
isoelectric point:4,87885
aromaticity:0,08584
hydropathy:0,11182

Domains

Domains [InterPro]
IPR005604
ATT
2–118
IPR005604 DC_0706
DC_0126
ATT
5–221
DC_0126 IPR011050
IPR012334
STR
399–497
IPR012334
XAO34402.1
1 897
Architecture
ATT
STR
ATT 2-221 | STR 273-897
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO34402.1
1 897
Domain Start End Length (AA) Confidence
N-terminal 1 416 416 0,9971
Central domain 417 806 391 0,9944
C-terminal 807 897 90 0,9900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-416
Central
417-806
C-terminal
807-897

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage PY065YO380
[NCBI] 		3145151 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO34402.1 [NCBI]
Genbank nucleotide accession
PP358257.1 [NCBI]
CDS location
range 37412 -> 40105
strand +
CDS
GTGCCTTACAGTTACGTTCTTCTCTCGGGGAACGGCTCTGCGACCAACTTCGGCTTCAGCTTCGGTTATCTCAGCAAGTTCCACATCGGAGTGAAGGTGAACGGTGTAGTCACCACCTTCACCTGGGTGACGGACTTCACCATTGGCATCACACCGGCCCCGGCCAACGGTGCAGTCATCGAGGTTCGACGGACGACTCCGTTGAATCAACCCATCGTGGACTGGTCAGATGGCTCCACGCTCACCGAAGCGGACATGGACCTCAACACTCGGTTCTCTCTGTACACTGCTCAGGAGGCCGCTGATGGTGTTGCAGCATCCATCACTCAGAACTCCCTGGGGCAGTGGGACGGCCAGAACCGCAGGGCCGTCAACTTCGCAGACCCGGTTGATCCACAAGACCTGGTAAACAAGCGATACTTCGAGGACGTGTACACACCTCAGTTGGACGCGAAGGTCACCGAAGCCACCAACCAGGCCAACAACGCGGCCTCCAGCGCCGCCACTGCGCAGGGCTATGCTCTCGCTGCGGACAACTCCGCGGACCTCGCTGCGGCCCTCCTGGCGACCTTCAAAGGCCAGTACCTCGGTGCCCTTGCATCTAACCCCACGCTGGACGGTAACGGCCAGCCGGTGACTGCTGGTGACCTCTACTTCAGCACCACCGAGAACCTGATGAAGGTGTACACCGGGTCCGCGTGGATCAACGCTGGGTCAACCGTCCAGTCCACCATCAAACGTCCTGTCACACCCATCGTGGCAACCGCAGGCCAGACCGTGTTCCCGGTGTCTGGTGGGTACGACGCCCCATACATTCTCGTGTTTGTGAATGGGGTTGAGGTGGCTTCTCCAGATGTGGACGTGACTAACGGCAGCACCATCGTATTCTCCAGCGGCCTGACTGCTGGAGATAAAGTGGATTACGCAGCGTTTGGTGCGTTCCAGGTGGCCAACCCGATTATCGATGGGACCAGTGCCGCAGACTTCATCAAGACACGCAATGCCCGTGTAGTTACCTCTATTGCCGACCTGAAGGCCCTCAATAAGAACACCTACAACTTCGTTCTCGTCACTGGCTTCTATGCTTCAGGGGATGGTGGCGGCGGTTTCTTCCTTCAGGTTCCCACGATGCCCACCAACGGTATCGTTCAGGTCGGGAATGACGGAGGCATCTGGCAGTTGGTGGTTGATCGGGATTATGTTTCCGCGAAACAACTCGGTGCGAGACTGGACGGTTCAACGGATGACTCCTCTCTCCTGAACAACGCCAAGTCCACTCTCGATGCTCTTGGTAAGAGGCTGTATATCCCGTCTGGGGTTTGCAGAATCTCAACAGCAATCACTCCACCAAAGGCTGGTGTGTTTGGGGATAGTCCTCAAGCGTCCATCATCCAGTGTAACAACTGCTCTGCATTCCTATTCCCAGCAAATTTCGGGCTCTCTCGTCCGGCTTGTGTCATTGAGAAGTTGGGGATTCAGTCCTACAGCAACACCTGCGATGGGCTATACGCTTTCCGTGCCCCTGGGGTGGCATCTGGAGCATCGCCCGTCTACAACAGCGGCCTAACTGTCAGGGATGTTGAGATTGGTACGGGCGGACGATTCGGTGGCGGTTTCTCACTGAAGGACTTCTTCCGAGTGAACGTAGAGAACATTGGCATGACTGATGTGAGTTCCGCCGTATTGCTCACCGGGTCAGTTGTGCAGGCAGTATTCCGAAATGTCACCGCAAACGGTGATAACGCACCAACTGTTCTTAACCGGTATGGTTTCCAAACAGCCGCAGCTTCCTATTCCAGCGGTACGCTAGGTCCTGAACACATTAGTACGTGGGATTGCAGCTTCATTCGCTATACACGCGGTGTTCAACACGATGCTGGGCTCATGGTCTCGTTCAACAATACGGACCTGGAAACTTTCACACACGGCTTCTATCTCTCGCAGCCCTGCACTGTGCGTGGTGGTATTAGCGCCCCGGCTCCGGCAGCTTCAGGGACTGCTGCGTGGATTGGGCTTTTCAAAGCTATTTCTGATTTTGACGTAGCCAACGGCACTCTGATCGATGACCTTGAGATCAACACGCTAAACACCCCAGGAACTCCAGCCTCTTCGTATGGGATTCTCATTGGCAACAATGTGAATAGGTGCGTTGGTACTACAATCCGTAGTCCCAGGATTCGAGGTAACACTAGTTCAATGGTCGGTGGGATTGTCGCTAATCTAGCTGGAGGTGACATCGTTATCGAGGATGCCATCATCAACGGCAGTGTGGTTACTGGAACTACGGTGTCTGTGAACAATGCTTCCTATGCAAGGGTTGTGGGCAATCGAAGCGCCACCGGTGGGACTGTAAATGGTTCCCTGTCAATCACAGATAACGGTGTTGGTTCCATTGGTGATGTTCGTGGAAATGCGTTTGCCGCCATTACCAACACCCTCAATGCCTATTCCGGTACATGGACGCCTGGAACAATTCCTAACGGAACACCAGCAGGAACAACGGTGGCCGTCCCTGGCGCAGTGGCTGGTGACAAAGTAGTGGTCGGCCTTTCCAGCCTGATCGGATCGGCCTACTGCCTCATTTCCGGCTATGTGTCTTCCACCGGAAATGTGACTGTCCTGTTGTATAACGTCTCTGGTGCATCACAGACGATTCCCTCCGGGACTCTCCAGGTAACAGTCCTCAAGTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
00532ed524d43ce12b15daedfc4042d85677a1d629c6494276f552a284d8747d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8109
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage biocontrol success depends on synergistic interactions with suppressive soil microbiota Fields,B., Franco Ortega,S., Harper,A. and Friman,V. 2024-11 — GenBank