Protein

View in Explore
Genbank accession
XJP07749.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPFGINTGDSGSPSSPIIPAADGLNYYPSAGQSLSIGHTATGNAPINTGALPDVYLYNGVPAIAPGSTESITPADVASVVPFTQPTRETHIFTLINTLRQKVGGVWMVAPCGRGGQEIEDLTVGTEPYINGLTMRDGATDAAAALGEGSVSVPFTTWIQGESDVADDLVGYNSELTAYITAFNSDFSNISGGVIPVFTTQVGTSGSVRFAANELDYSNKSPLVTCAGPNWPISRLHPSAPTDYTHLNPHGYEILGAMLAASVEQVVYRGNPGYKPLQPDSLSITGSTVSIDMHVPAGSLTVDVETFPEAPMLGIKFGYASAVSSTNGTYKVVGDRVILDFDLGGVPIVVGSTIDGGNTMQDHSTTDGVSVPLINLRGSTSNIDGWLDWCCQFSIPVTKEMGALDPDTDNVWTFGTPTISSADSFVTVAGTSSCYFLSGETYQVDYDSADIDAGSARLWVGDDNHTIVAGGASLVMTRGSATRLRIQSGNGGFTGRVKNLRITKLS
Physico‐chemical
properties
protein length:505 AA
molecular weight: 52722,04900 Da
isoelectric point:4,41329
aromaticity:0,07921
hydropathy:-0,01366

Domains

Domains [InterPro]
IPR036514
STR
29–269
IPR036514
SSF52266
STR
30–283
SSF52266
DC_1772
STR
263–370
DC_1772
XJP07749.1
1 505
Architecture
STR
STR 29-370 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage vB_Psp_PY6
[NCBI] 		3374930 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas sp.
[NCBI] 		53249 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XJP07749.1 [NCBI]
Genbank nucleotide accession
PP806536.1 [NCBI]
CDS location
range 33153 -> 34670
strand -
CDS
ATGCCATTTGGAATAAACACAGGGGATAGCGGGTCGCCATCCTCGCCAATAATACCGGCCGCTGACGGGCTGAACTACTACCCAAGTGCGGGGCAGTCTTTGAGCATAGGCCACACCGCCACAGGGAACGCCCCGATCAATACGGGTGCCTTGCCGGACGTGTATCTATATAACGGCGTGCCCGCCATTGCGCCGGGCAGCACGGAAAGCATAACACCCGCCGATGTCGCGAGCGTTGTCCCTTTCACGCAGCCAACCCGCGAAACGCACATTTTTACGCTGATCAATACGCTAAGGCAGAAAGTGGGCGGCGTTTGGATGGTTGCGCCGTGCGGGCGAGGCGGCCAAGAGATCGAAGACCTGACAGTGGGCACGGAGCCGTACATAAACGGCCTGACCATGCGCGACGGGGCGACAGACGCCGCCGCCGCACTGGGCGAAGGGTCGGTGTCAGTGCCGTTTACTACGTGGATACAAGGCGAGAGCGACGTCGCGGACGACCTAGTAGGGTATAACAGCGAGCTAACCGCTTACATAACCGCGTTTAATTCCGACTTTTCGAACATATCAGGCGGAGTGATACCCGTATTTACTACGCAAGTAGGAACCTCGGGGTCTGTACGCTTCGCAGCTAACGAGCTGGACTACAGTAATAAAAGCCCACTCGTCACATGCGCAGGCCCTAACTGGCCAATCTCAAGACTACACCCGAGCGCCCCCACGGACTACACGCACCTAAACCCGCACGGCTACGAGATACTCGGCGCCATGCTGGCGGCCAGTGTTGAGCAGGTGGTTTACAGAGGCAACCCGGGTTATAAGCCGCTGCAGCCCGACTCGCTGTCAATCACAGGGAGCACAGTATCTATCGACATGCACGTGCCGGCGGGGTCGCTCACGGTAGACGTCGAGACGTTCCCGGAAGCGCCCATGCTGGGCATAAAATTCGGGTACGCGTCGGCGGTGTCGTCCACCAACGGGACATACAAGGTAGTAGGGGACCGCGTGATCCTAGACTTTGACCTCGGCGGCGTCCCTATCGTGGTAGGTTCTACGATTGACGGCGGCAACACCATGCAGGACCATTCGACCACCGACGGCGTGAGCGTGCCGCTCATTAATTTAAGAGGCAGCACGTCGAACATAGACGGGTGGCTAGATTGGTGCTGTCAGTTTAGCATACCAGTCACTAAAGAAATGGGCGCGCTAGACCCGGACACGGATAATGTTTGGACGTTCGGCACGCCGACGATCAGCTCTGCGGACTCATTCGTCACCGTAGCAGGCACCAGCTCGTGCTATTTCCTATCGGGCGAGACCTACCAGGTCGACTACGACTCGGCGGACATCGACGCGGGATCGGCGCGGCTATGGGTGGGAGACGACAACCACACAATCGTCGCAGGGGGTGCCTCGCTAGTCATGACGAGAGGGTCGGCCACCCGCCTCCGCATACAATCGGGAAACGGAGGCTTTACAGGCCGCGTTAAAAACCTCAGAATAACAAAACTATCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d8053de7ac36c3ab1247ba6ed92ae282439df0848edb6cc67becaa11787663c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7545
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of bacteriophages from antarctic seawater Rojas,N., Araneda,D., Bastias,R., Olivares,J., Plaza,N., Katharios,P., Garcia,K., Alcaman,M.E. and Higuera,G. 2009-01 — GenBank