Protein

View in Explore
Genbank accession
QNJ51727.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKTIVITLLLSISTYSQVGIATTTPTETLDVNGTARVRNLTDGTIQTNSTGVLSIMPYKAYAMAVVSLNCSILRGFGVASLTRLNNTTYRVSFVNPLPNNDYVINFSARQRQLSYDNVTVNGFDVIVSQNPNQITNFDFNFSVFSIY
Physico‐chemical
properties
protein length:147 AA
molecular weight: 16208,20230 Da
isoelectric point:8,84978
aromaticity:0,10204
hydropathy:0,14286

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage FCOV-F14
[NCBI] 		2764956 Uroviricota > Caudoviricetes > Ficleduovirus >
Host Flavobacterium columnare
[NCBI] 		996 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNJ51727.1 [NCBI]
Genbank nucleotide accession
MT585281.1 [NCBI]
CDS location
range 45443 -> 45886
strand +
CDS
ATGAAAACAATTGTTATCACATTATTATTATCAATATCAACTTATTCTCAAGTTGGTATTGCAACAACAACACCAACTGAAACTTTAGATGTAAACGGAACGGCAAGAGTTCGAAATTTGACAGATGGAACAATTCAAACAAACTCAACAGGTGTTTTATCAATTATGCCTTATAAAGCTTATGCAATGGCTGTAGTATCTTTAAATTGTTCTATTTTAAGAGGTTTTGGAGTGGCTAGCTTAACAAGGTTAAACAACACAACGTATAGGGTTAGTTTTGTCAACCCGCTACCTAATAACGACTATGTTATAAACTTTTCAGCGCGCCAAAGACAATTGAGTTATGACAATGTTACGGTTAATGGTTTTGATGTAATAGTTAGCCAAAACCCTAACCAAATAACAAATTTTGATTTTAACTTTTCAGTATTTTCAATTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d9b9d792c4b57e6fc52f741ce8573acdc870b4bedaab1a6d14e0c1ea1813684
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7640
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Repeated isolation of genetically similar Flavobacterium columnare phages with a strong potential for pathogen control Runtuvuori-Salmela,A., Kunttu,H.M.T., Laanto,E., Almeida,G.M.F., Makela,K., Middelboe,M. and Sundberg,L.-R. 2020-09-23 — GenBank