Protein

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Genbank accession
QBX22963.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MYGMKIGEFHSYKDFGLVPTSKPIINLPSPKLEYLDIPGMQGELDITESLGGEVLYEMRTGSFEFLVSDPEKWREVYGKLLSTVHGKKTNIVLDTEKDYVYQGRMWVSEFKSDKNYSLITLDYKLEPYKYKISDLVNGVEIIHKLEGVVITNSKTVTIPFDSDMSIVPEFNNKTENIVTLNFKGKKFSIKKGINRFPEVRERKDLVLSLTGNSTIDISYKRGWL
Physico‐chemical
properties
protein length:224 AA
molecular weight: 25728,30910 Da
isoelectric point:6,85583
aromaticity:0,11161
hydropathy:-0,36786

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
2–130
G3DSA:2.40.30.200
DC_2315
RBD
105–224
DC_2315
QBX22963.1
1 224
Architecture
ATT
RBD
ATT 2-130 | RBD 131-224
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX22963.1
1 224
Domain Start End Length (AA) Confidence
N-terminal 1 221 221 0,7937
Central domain 222 221 1 0,0461
C-terminal 222 224 2 0,9025
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-221
Central
222-221
C-terminal
222-224

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan108
[NCBI] 		2547979 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus constellatus
[NCBI] 		76860 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX22963.1 [NCBI]
Genbank nucleotide accession
MK448841 [NCBI]
CDS location
range 43287 -> 43961
strand +
CDS
ATGTATGGGATGAAAATTGGTGAATTTCATAGTTATAAAGACTTTGGTCTTGTTCCAACAAGTAAGCCTATTATTAACCTACCATCTCCTAAATTAGAATATCTTGATATACCCGGCATGCAAGGAGAATTAGATATTACAGAAAGCCTTGGAGGAGAGGTCTTATATGAAATGAGAACAGGCTCATTTGAATTTCTTGTATCAGATCCTGAAAAATGGCGAGAGGTTTATGGGAAACTTTTAAGCACTGTTCATGGGAAAAAGACCAATATTGTGCTTGATACGGAAAAAGACTATGTATATCAAGGCAGGATGTGGGTGAGTGAATTTAAATCAGATAAAAACTATTCACTTATTACTTTAGACTACAAGCTTGAGCCATATAAATATAAGATTTCTGATTTGGTAAATGGTGTAGAGATTATTCATAAACTTGAGGGCGTTGTTATTACAAATAGCAAGACTGTGACAATTCCATTTGATTCAGATATGAGTATAGTTCCTGAGTTTAATAATAAAACAGAAAATATAGTGACATTAAATTTTAAAGGAAAGAAGTTCAGTATCAAAAAAGGGATAAATAGATTTCCGGAAGTAAGAGAAAGAAAAGATTTAGTGCTTTCTTTAACAGGTAACAGCACCATAGATATTTCATATAAAAGGGGGTGGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
82e0790314ddb7caf7312a4f3c6fcd4d0894a74058deda8f096175417e6fdcb2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9480
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank