Protein

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Genbank accession
QVJ13257.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALERQEVKNPTGIVTDIAPADLPLEKWSFGNNVRFKNGKAQKALGHTPIFDTAQAPILDMFPFIRNNIPYWLLCSEQRLYLADGTTIIDVSPGPYSASITNRWSVGSFNGVIFANDGVNPPHHLPPSESTFRVLPNFPANTTFKRLKSFKNFLVGLNATSNSVEMPQMVWWSTSADAGGVPASWDPTDPTKDAGQNTLADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGGLFIFQFQQLFNDVGILGPNCAVEFDGNHFVVGHGDVYVHNGVQKQSVIDAQVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWKENTWSIRDLPNVLSGAYGIIDPKVSNLWDDDPNPWDTDTSVWGEGSYNPAKSSMIFSSFQDKKLFLFGNNSTFSGQNFVSTLERSDIYLGDDRMMKTVSAIIPHITGNGTCNIWVGNAQVQGSGIRWKGPYPYRIGQDYKIDTKHVGRYIALKFDFSSEGDWYFNGYTIEMAPKAGMR
Physico‐chemical
properties
protein length:513 AA
molecular weight: 57508,93710 Da
isoelectric point:5,71609
aromaticity:0,12865
hydropathy:-0,33606

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVJ13257.1
1 513
Domain Start End Length (AA) Confidence
N-terminal 1 373 373 0,7623
Central domain 374 502 130 0,0878
C-terminal 503 513 10 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-373
Central
374-502
C-terminal
503-513

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA31
[NCBI] 		2833441 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ13257.1 [NCBI]
Genbank nucleotide accession
MZ089738 [NCBI]
CDS location
range 19437 -> 20978
strand -
CDS
ATGGCCCTAGAGAGACAAGAGGTCAAGAACCCTACGGGGATTGTGACCGATATCGCCCCCGCTGACCTGCCACTGGAGAAATGGTCCTTCGGGAACAACGTCCGGTTTAAGAACGGCAAGGCTCAGAAGGCTCTGGGCCATACGCCTATCTTTGATACAGCCCAGGCCCCAATCTTGGATATGTTCCCTTTCATCCGGAATAACATCCCCTATTGGCTCCTGTGTTCTGAACAAAGGTTGTATCTAGCCGACGGGACTACAATCATCGATGTATCCCCAGGACCTTACTCTGCTAGTATAACTAACAGGTGGTCTGTAGGATCGTTCAACGGGGTAATCTTTGCTAACGATGGGGTTAACCCTCCTCATCATCTTCCACCGTCAGAATCAACCTTTAGGGTACTCCCTAACTTCCCAGCGAATACTACTTTTAAGAGGCTTAAGTCTTTTAAGAACTTCCTGGTTGGCTTAAACGCTACAAGTAACTCTGTAGAAATGCCGCAGATGGTCTGGTGGAGTACCTCGGCTGATGCTGGTGGTGTACCCGCTTCTTGGGACCCAACGGACCCTACTAAAGATGCTGGTCAGAACACCTTGGCTGATACCAATGGTGCTATCGTGGATGGTGTGAAGCTTCGTGACTCCTTCATCATCTACAAGGAAGACTCTGTATACTCCATGCGGTATATCGGTGGATTGTTCATCTTCCAGTTCCAGCAGTTGTTTAACGACGTAGGTATTCTTGGGCCCAACTGTGCAGTAGAGTTCGATGGTAACCACTTTGTAGTAGGCCACGGTGATGTATATGTCCACAACGGTGTGCAGAAGCAGTCTGTTATTGATGCTCAGGTCCGTAAGTTCTTCTTCTCGGATATTAACCCTGACAACTATCAACGGACCTTCGTACTTGCAGACCACGTGAATACTGAAATGTGGGTATGCTACTCTTCCACTAGGTCTGAGCCAGGTAAGCACTGCGACAGGGCTATCATCTGGAACTGGAAGGAAAACACTTGGAGTATCCGAGACCTTCCCAACGTTCTCAGTGGAGCCTACGGGATCATCGACCCTAAGGTGTCTAACCTCTGGGATGACGACCCCAACCCCTGGGATACTGATACTTCGGTCTGGGGTGAAGGCTCTTATAACCCAGCAAAGTCCAGTATGATCTTCTCGTCTTTCCAGGATAAGAAGTTGTTCCTCTTCGGTAATAACTCTACATTCTCTGGACAGAACTTCGTCAGTACCCTTGAGAGATCCGATATCTATCTCGGGGATGATCGAATGATGAAGACAGTGAGTGCCATCATTCCACACATTACTGGTAACGGTACTTGTAACATCTGGGTGGGTAACGCTCAGGTACAAGGTTCTGGTATTCGATGGAAAGGCCCTTACCCATACCGGATTGGTCAGGACTATAAGATTGACACTAAACATGTGGGCCGGTATATAGCCTTGAAGTTCGATTTCTCTTCGGAGGGGGATTGGTACTTCAATGGGTACACTATTGAAATGGCCCCGAAGGCAGGTATGCGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7b8cf212d66d80487c18ce6f96ffc94b5d5ab54bafb33aad8b6f97d5edd88b23
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8949
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank