Protein

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Genbank accession
ALP46973.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSSINLPGGGQPLPKYVEEAPVNGLLYGRKDEAWEPIPEDSLTPFPLGTTPNSFDAETGDRAAAIALRDAYASANPSWVAFYVNNPTSAIDLVYEDISVGGTVAERQTYTGTQWISQRIVEGIPGPIGPSGEGSIPPFASIAERDSFFASSGNKSLLKKGLPVFVQEFEGRASSYYWRGETNPNTYDASKFSLAAVQSGNGDLYLANAHKISSSGQNIAITNIIDNVSFHPVWQTYEEGNTATVRVRSIESVNEYSDKSAQITNPRWELVQMPNNRTLYSVVVDFVNAYDEIDVVVYKNTDEYYQTKIFDITPGEVDVLIEPPFDIRSMDVLELELRNPNLDVVVWGNLSTGIPWNKPTTRDFTDETVVIQPDLDAVETRVSDIEANAIVTGDNVSELTNDAGYISDKDIIFQKSNNTGTNVLTLNGTGEEGTIPLSQTDENGVLFEYSSTTDNFRPLEDKPMHIKLRISIDRSGGGSDPEIITWVESAATDTTVPNAFTQETSAFRMVDLQTDRTLFLIDTILNMDSSRYYRIRLRNLNGDNFDVDTFGPFTTSSGNDIFAPAVEFMLSR
Physico‐chemical
properties
protein length:571 AA
molecular weight: 62975,81820 Da
isoelectric point:4,30387
aromaticity:0,09632
hydropathy:-0,34781

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
11–44
G3DSA:1.20.5.320
DC_1057
STR
38–548
DC_1057
ALP46973.1
1 571
Architecture
STR
STR 11-548 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALP46973.1
1 571
Domain Start End Length (AA) Confidence
N-terminal 1 403 403 0,9950
Central domain 404 560 158 0,0123
C-terminal 561 571 10 0,9861
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-403
Central
404-560
C-terminal
561-571

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phi-Grn1
[NCBI] 		1747713 Uroviricota > Caudoviricetes > Pantevenvirales > Schizotequatrovirus > Schizotequatrovirus valkk3
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALP46973.1 [NCBI]
Genbank nucleotide accession
KT919972 [NCBI]
CDS location
range 35038 -> 36753
strand +
CDS
ATGAGTTCTATTAATTTACCTGGCGGAGGACAACCTCTACCAAAATACGTCGAAGAAGCGCCTGTAAATGGGTTACTATACGGTCGTAAAGATGAAGCATGGGAGCCAATCCCTGAAGATTCACTAACACCGTTTCCATTAGGAACGACACCTAATTCATTCGATGCAGAGACTGGCGACAGAGCCGCAGCAATCGCTCTAAGAGACGCTTATGCATCAGCAAACCCGTCATGGGTTGCGTTTTATGTAAACAACCCGACATCTGCGATTGACCTTGTATATGAAGACATTTCTGTTGGCGGGACAGTTGCTGAAAGACAAACGTATACAGGAACACAATGGATTTCACAGCGTATTGTTGAAGGGATACCCGGGCCAATCGGGCCATCAGGTGAAGGGTCAATCCCTCCATTCGCGTCGATTGCTGAACGCGATTCTTTCTTCGCGTCATCAGGGAATAAATCACTATTGAAAAAAGGATTACCTGTATTCGTTCAGGAATTTGAAGGTCGAGCAAGCTCATATTATTGGAGAGGCGAGACAAACCCAAATACGTACGATGCTTCTAAGTTCTCACTAGCCGCAGTTCAATCAGGGAACGGTGATTTATACTTAGCAAATGCGCATAAGATATCTTCGTCAGGTCAGAATATAGCAATAACCAATATTATCGACAACGTGAGCTTTCACCCCGTATGGCAGACATACGAAGAAGGGAATACTGCAACGGTACGTGTGCGTTCCATCGAGTCTGTTAATGAATATTCTGATAAATCAGCACAGATAACTAACCCGCGTTGGGAACTAGTGCAGATGCCAAACAACAGAACGTTATACTCAGTTGTGGTTGATTTTGTCAATGCATACGATGAAATTGATGTTGTCGTTTATAAAAACACAGATGAATATTACCAAACTAAAATATTCGATATTACACCGGGCGAAGTTGATGTATTAATCGAACCACCGTTTGACATTCGTTCAATGGACGTGCTTGAGCTTGAGTTGCGCAACCCGAACTTAGATGTTGTAGTATGGGGTAACTTATCAACAGGAATCCCATGGAATAAACCAACAACACGTGATTTTACCGATGAGACTGTTGTGATTCAACCTGATTTAGATGCAGTCGAAACAAGAGTAAGTGACATCGAAGCAAACGCGATTGTCACTGGGGATAATGTTTCTGAACTGACAAATGACGCGGGATATATTAGCGACAAAGACATCATTTTCCAGAAGAGCAATAATACTGGAACTAACGTGTTAACGCTAAACGGGACAGGTGAGGAGGGTACTATCCCACTATCGCAAACCGATGAAAATGGGGTGTTATTCGAATACTCGTCAACTACTGATAATTTCAGACCACTTGAAGATAAACCAATGCACATCAAACTTAGAATAAGTATTGATCGTTCTGGTGGCGGGTCAGACCCTGAGATTATAACGTGGGTTGAATCAGCAGCGACAGACACAACAGTTCCTAATGCATTTACACAAGAAACATCAGCATTTCGAATGGTTGATCTGCAAACCGACCGTACATTATTTTTAATCGATACGATTTTAAATATGGACTCAAGTCGTTATTATCGCATAAGACTTCGTAATTTAAACGGCGACAATTTTGATGTTGATACATTCGGCCCGTTTACAACAAGTTCGGGTAATGATATTTTTGCACCCGCAGTTGAGTTTATGCTTAGTCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
03da5fe24b5b81311585f0529bbc9cbc6a2267501c5245ed77eecaa8a3f99195
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5892
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50