Protein

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Genbank accession
QQK87893.1 [GenBank]
Protein name
putative packaged DNA stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTIMRLRSVGNTGVTTDIPAYDLKPSDWSWANNVRFQANRVQKIGGAKASLTRAMPKQHPLGVVQRPLTEALLYGTYNPVTKKGELWEASGNNHTQISKLASGGGFVQYNATPQYGWDYTTLSNTIIFNTRLSDPQGIKPGDSNFTDLPGWGQPNKAGGTLVNWKANRIRAFKNYLLCMGIWEAGVEYPQRVRWSDVAMVGQLPSNWVQDDDTKDGGFNDLTDSLSHIIDGRPLRDSFVVYTNRDTFIMDYVGGTMVFNFRKIFSDSGILAPNCCVEFEGKHFVISEDDIFVHNGSTRQSVATGRVKDYLMGQISQNNYDATRVYAYPTKKEIWIAYVSSGNTGETVGPNSEKVYACDKAAVWSWQYDTWSFTDLPYVYDIGIGISPETDTRFWDDPLFVPTPEHPKPYSDYPWEEPEIPDDTWEREAQAFTRHVMFGASSHMCFYQMDTGYVWDRWNSTTGATNPVPVVCELQRSALDFDEQEPDISYHKWWRAVYPQMGGEGTVRFYVGGSNSPNGEPSWDSWQDFDIENDSKVDCFSNYRYPAIRLLDASEGTWSMVGYDVEYFREGNR
Physico‐chemical
properties
protein length:572 AA
molecular weight: 64941,34170 Da
isoelectric point:4,89932
aromaticity:0,13636
hydropathy:-0,56014

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQK87893.1
1 572
Domain Start End Length (AA) Confidence
N-terminal 1 375 375 0,4935
Central domain 376 561 187 0,2512
C-terminal 562 572 10 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-375
Central
376-561
C-terminal
562-572

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage pSal-SNUABM-01
[NCBI] 		2796517 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQK87893.1 [NCBI]
Genbank nucleotide accession
MW296032 [NCBI]
CDS location
range 17926 -> 19644
strand +
CDS
ATGACAATTATGAGATTACGTAGTGTCGGGAATACCGGTGTTACTACTGATATTCCTGCATACGACTTAAAGCCCTCTGACTGGTCTTGGGCTAACAACGTTAGATTCCAAGCCAACAGGGTTCAGAAGATTGGAGGCGCTAAAGCCTCCCTTACTCGTGCAATGCCAAAACAGCACCCGTTGGGTGTTGTTCAGCGTCCACTTACTGAAGCTCTTTTATACGGGACTTATAACCCTGTTACCAAGAAGGGTGAATTGTGGGAAGCTTCTGGTAACAACCATACTCAGATTTCTAAGCTGGCATCAGGTGGTGGTTTTGTTCAATACAACGCTACCCCCCAATATGGTTGGGATTATACCACCCTTTCTAACACAATCATCTTCAACACAAGGCTTTCAGACCCACAAGGTATTAAACCTGGTGATTCTAACTTTACAGACCTTCCTGGTTGGGGTCAACCTAATAAAGCAGGTGGTACTTTAGTTAACTGGAAAGCAAACCGAATTCGTGCATTTAAGAACTACTTACTTTGCATGGGCATTTGGGAGGCAGGTGTTGAATATCCCCAACGTGTACGCTGGTCTGATGTTGCAATGGTTGGTCAGTTGCCATCTAACTGGGTTCAAGATGATGATACAAAGGATGGTGGTTTTAACGACCTGACAGACTCCCTCTCACACATCATTGACGGTCGTCCTCTTCGTGACTCCTTTGTTGTATATACAAACCGAGACACGTTCATTATGGACTACGTTGGTGGTACGATGGTGTTCAACTTCCGTAAAATCTTCTCTGACTCTGGTATTCTTGCCCCAAACTGTTGTGTTGAATTTGAAGGTAAGCATTTTGTTATCTCAGAGGATGATATCTTTGTACACAATGGTTCGACTAGGCAATCAGTTGCAACAGGTCGCGTCAAAGATTACCTGATGGGTCAGATTTCTCAGAACAACTACGATGCAACTCGCGTTTATGCTTATCCAACTAAGAAAGAAATCTGGATTGCATACGTATCAAGTGGTAACACTGGTGAAACGGTTGGTCCTAACTCTGAGAAAGTTTACGCTTGTGACAAAGCAGCGGTATGGTCTTGGCAGTACGATACTTGGTCTTTCACAGACCTTCCATATGTCTATGACATTGGAATTGGTATCTCCCCTGAAACTGATACTCGTTTCTGGGACGACCCACTGTTTGTGCCAACCCCCGAACATCCAAAGCCATACAGTGATTATCCTTGGGAAGAACCTGAGATTCCTGATGATACGTGGGAACGAGAGGCTCAAGCCTTTACAAGACACGTAATGTTCGGTGCATCCTCTCATATGTGCTTCTACCAAATGGATACAGGTTATGTTTGGGACAGGTGGAATTCTACCACAGGGGCTACTAACCCAGTGCCAGTTGTTTGTGAACTTCAGCGCTCTGCACTGGACTTTGATGAACAAGAACCTGACATTTCATATCACAAGTGGTGGAGGGCAGTTTATCCACAAATGGGTGGTGAAGGTACAGTAAGATTTTATGTTGGTGGTTCTAATAGCCCCAACGGAGAACCATCTTGGGACTCGTGGCAAGATTTTGACATTGAGAATGATTCTAAGGTGGATTGTTTCAGTAACTACAGATATCCAGCAATTAGACTCTTGGACGCTTCGGAAGGTACTTGGTCAATGGTGGGGTATGATGTGGAATACTTCAGAGAAGGGAATAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
64ed02d95e45f7b8906cc0d81b980b899441d027a71db3d8d9ae4caa7708292b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8511
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50