Protein

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Genbank accession
WPK19489.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVFSNLEGTMKKSFILGKNGAQITTNGSVVQIQNYSGTQLLPISAGEPTANTHLVTLGYLNAHSGGGSSGILRGTTAPSDSIGLDGDVYFLVDSTNVLQIYIKDSSPGTDSSYVTTEIVPVSALIIILTHYQNQFMVEVLIL
Physico‐chemical
properties
protein length:143 AA
molecular weight: 15081,90310 Da
isoelectric point:4,80047
aromaticity:0,06993
hydropathy:0,23636

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK19489.1
1 143
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,8295
Central domain 143 142 1 0,2027
C-terminal 143 143 0 0,0000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-142
C-terminal
143-143

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SD-6_S16
[NCBI] 		3096174 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK19489.1 [NCBI]
Genbank nucleotide accession
OR699182 [NCBI]
CDS location
range 313766 -> 314197
strand +
CDS
ATGGCAGTTTTTTCTAATTTAGAAGGAACCATGAAGAAGTCCTTCATTCTTGGGAAGAATGGTGCACAGATTACCACAAATGGTAGTGTTGTGCAAATTCAAAACTACTCAGGAACACAACTTCTTCCAATTTCAGCAGGTGAACCAACTGCAAACACACACTTGGTTACATTGGGATATTTAAACGCACACAGTGGTGGTGGTAGTTCTGGTATCTTACGTGGAACAACAGCACCATCCGATTCGATCGGTCTAGATGGTGACGTTTACTTTTTGGTTGATAGTACTAATGTTCTTCAAATTTATATTAAAGATAGCTCACCTGGGACTGATAGCTCATATGTAACTACTGAAATAGTTCCTGTTTCTGCATTGATCATTATACTTACACACTACCAGAATCAGTTCATGGTAGAGGTTCTGATATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f16683af93a84c275ab0f73b3cbd42969fa505f8a6e3c70b790f0d354debc422
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6382
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence a group of lytic Salmonella phages Dlamini,S.B., Montso,P.K., Ateba,C.N., Mnisi,M.C. and Mlambo,V. 2023-09 — GenBank