Protein

View in Explore
Genbank accession
XAV38167.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSAMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGASTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGASRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWTDVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNSNRAKDFDYRLISEADGSLAFYSRQGSAGPTQDILFNRNSVTFFQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYTPWDSGNFDPSTKLTVSATNQIAGPTGIWNTNGNTGNMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDESNIRTHINTMAARPIWGNVEFWGPWNFDPNLKLTLNAFNDSSYTRMTNSGAKDVGIASMTSYADAAMSFFNYEASNPTGPRAAVISFVRNGSRGVLFGLDSDNKLKWGGYFRS
Physico‐chemical
properties
protein length:748 AA
molecular weight: 81138,22120 Da
isoelectric point:5,42849
aromaticity:0,11364
hydropathy:-0,32941

Domains

Domains [InterPro]
DC_0009
ATT
1–210
DC_0009
cd19958
STR
152–231
cd19958
DC_1788
STR
167–687
DC_1788
XAV38167.1
1 748
Architecture
ATT
STR
ATT 1-210 | STR 211-687 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_RyC23_M4LORT
[NCBI] 		3148939 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAV38167.1 [NCBI]
Genbank nucleotide accession
PP781973 [NCBI]
CDS location
range 61945 -> 64191
strand +
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATTCCGCAGACCTCTTCCACTGGTTTTGCCAACCTTCGCGACGGCTACACGCCGGACTACGAAATCAGTCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGGAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGACAAATGGCACCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGCGTCGGAAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAATGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCATGGTCGGCGATGCGCTCCAACATCCCGATGCCGGCCGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTTATCGCTTCTCAGAATGCCCCCGTATATCCGGCTTCCGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGATGGCATGATTCTTCGGGTCAAGTTCAATACCATGAACACCGGCGCCTCCACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACCGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTATTCGACGCAGCAGGCGACCGCTGGAGAATCCTCGCAGGCGCGTCACGCATCCAAGTTGGCAACGCCGATCAGGACTACCAGGCGCCGAGTTGGAAGCAAGTTAAAGACTATGTCGCGTCCCAAAAGCTCACCGAAGTGGATTGGACGGATGTCGTCAACAAGCCGAACGTCGCTATCCAAGATACAACGCCGTGGTTCGCCAATCTGGAGCTGTCCGATGCTCGGCCTTTCATCGATTTCCACTTCAACAGCAATCGCGCCAAAGATTTTGACTATCGGCTGATATCTGAAGCAGACGGATCGCTGGCTTTCTATTCGCGGCAGGGGTCTGCTGGGCCTACCCAGGACATCCTGTTCAACCGAAATTCCGTGACTTTCTTCCAGCCGCGACTCGATGTGGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACCGCCGATCAGCCCGGTTGGAAATTCACCTTTGCACAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCGGACGGTTCCTATCGTTCACAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCTGGGAACTTCGATCCTTCCACCAAGTTGACGGTGAGCGCCACGAACCAAATCGCCGGCCCAACGGGGATTTGGAATACCAACGGCAACACCGGCAACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGCATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCGCTCGGCAATAACTCCTATGTGATCACCGACGAATCCAACATCCGAACCCATATCAACACAATGGCTGCGCGCCCGATTTGGGGGAATGTCGAGTTCTGGGGTCCGTGGAACTTCGATCCGAATCTTAAACTCACTTTGAACGCTTTCAATGATAGCTCATACACCAGGATGACCAACAGCGGCGCGAAAGACGTTGGTATCGCGTCCATGACGAGTTATGCTGATGCGGCCATGTCATTCTTCAACTATGAAGCCTCGAATCCGACCGGGCCGCGCGCGGCCGTTATTTCGTTCGTGAGAAATGGATCGCGTGGAGTGCTATTCGGCTTGGATTCTGACAACAAGCTGAAGTGGGGCGGATATTTTCGTTCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7a75e114a2c35da2b1e14779412cc543c443cdcd298978f9356ae737e74c305e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6415
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Description of a lytic phage, vB_PaeM_RyC23_M4LORT, with activity against Pseudomonas aeruginosa high-risk clones Gonzalez de Aledo,M., Hernandez-Garcia,M., Maruri,A., Caballero,J.D. and Canton,R. 2023-01-03 — GenBank