Protein

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Genbank accession
YP_009791782.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MLFYKGGHMATNIKTVMTYPLDGSTTDFNIPFEYLARKFVRVTLIGVDRKELILNQDYRFATKTTISTTRALGPADGYNLIEIRRYTSATERLVDFTDGSILRAYDLNISQVQTLHVAEEARDLTADTIGVNNDGDLDARGRRIVNVADAKDPGDAINLGQVQKWNDSALNSANRAKQEADRATARANDANNSANASASSASSSAGSAELSKQWAVKETAVEPNLESSRTYAIHSMSYRNEAKDAADRAKTSEASAKDSESNAKNSENNAKSSEVKAKASEERAIEEASKLGNMNDFAAAIDSVDGNHVNMKGNIKTPGNITGGGLIATGDARVTGTIAAGEFSTLGKEVTINQRTSDWRVPLYTWKALNLRNDLVQELRDNGGSDHYNHLYRLHIDNRPVHVGNRQGLHIGWNENTNGESNFINNRGGGGGGFIFRTVNNENTVETGRVTFTGGGQVHANHFQAANGARIEANNNIVGQNLYAGMGNAALGPDGNLSGGVWSGVGGSLWSCLNDRYQFAKPPAGVRLYTARGGDYLEGNVDGKSVGFRWFLSDRRLKENLKVVRSADDMLNIIRSYIPVSYKYKDSEYVDSRGKTVTITGKNSRAGFITQDLIRIWPEAVDVMSDGMQSPDPNQIIGGLMLLVKNLDERVQALESKSTTD
Physico‐chemical
properties
protein length:661 AA
molecular weight: 71883,68460 Da
isoelectric point:6,31728
aromaticity:0,06959
hydropathy:-0,55461

Domains

Domains [InterPro]
DC_0657
STR
1–643
DC_0657
IPR005604
ATT
9–139
IPR005604 Coil Coil IPR030392
IPR030392
CHP
553–658
IPR030392
YP_009791782.1
1 661
Architecture
ATT
STR
CHP
ATT 1-139 | STR 140-643 | CHP 644-658 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009791782.1
1 661
Domain Start End Length (AA) Confidence
N-terminal 1 221 221 0,9045
Central domain 222 420 200 0,5742
C-terminal 421 661 240 0,8179
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-221
Central
222-420
C-terminal
421-661

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage 2050H2
[NCBI] 		2024251 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teetrevirus
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009791782.1 [NCBI]
Genbank nucleotide accession
NC_047844.1 [NCBI]
CDS location
range 33385 -> 35370
strand +
CDS
ATGCTATTTTACAAAGGAGGTCACATGGCTACAAATATTAAGACCGTGATGACTTACCCGCTGGATGGTTCAACTACGGACTTTAATATTCCGTTCGAGTATCTGGCTCGTAAGTTCGTCCGAGTGACCCTTATCGGTGTTGACCGAAAGGAACTCATCTTGAATCAAGACTATCGTTTTGCGACTAAGACCACAATCTCCACAACGAGAGCGTTGGGGCCAGCGGACGGTTATAACCTTATCGAGATTCGTCGGTACACCTCAGCGACTGAACGTCTGGTTGACTTTACGGATGGCTCAATCCTCCGTGCGTATGACCTGAACATCTCGCAGGTGCAGACCCTCCACGTTGCTGAGGAAGCGCGTGACCTTACCGCTGATACGATTGGCGTTAACAACGATGGTGACTTGGATGCTCGTGGTCGTCGTATCGTGAACGTTGCGGACGCTAAAGACCCCGGTGACGCAATCAACTTAGGTCAAGTCCAGAAGTGGAACGACTCTGCGTTGAACTCTGCGAATCGAGCGAAACAGGAAGCTGACCGTGCGACCGCTCGTGCAAACGATGCGAACAACTCTGCGAACGCATCTGCAAGCTCTGCAAGCTCTTCTGCTGGGTCTGCTGAGTTATCAAAACAGTGGGCCGTTAAGGAAACCGCTGTGGAGCCAAATCTAGAATCATCACGAACCTATGCGATTCACTCCATGTCATACCGGAATGAGGCTAAAGATGCAGCCGACAGGGCAAAAACTTCTGAGGCCAGTGCGAAGGATTCCGAAAGTAACGCGAAGAACTCTGAGAACAACGCTAAGTCCTCCGAGGTCAAAGCAAAGGCTTCTGAGGAACGAGCCATTGAGGAAGCCAGTAAGTTGGGCAATATGAATGACTTCGCGGCTGCGATTGATAGTGTGGATGGTAATCATGTGAATATGAAGGGAAACATTAAAACTCCCGGTAATATCACAGGTGGTGGCCTAATCGCTACCGGAGATGCCCGCGTTACCGGTACGATTGCTGCTGGTGAGTTCAGCACGCTAGGTAAGGAGGTCACTATAAATCAACGAACTAGTGACTGGCGTGTTCCACTGTATACATGGAAAGCCCTAAACTTACGTAACGACCTAGTTCAAGAGTTGCGCGATAATGGCGGCTCTGATCACTATAACCATTTATACCGCCTTCATATAGACAACCGACCTGTCCATGTAGGTAATAGGCAAGGATTACATATAGGGTGGAATGAGAATACCAACGGTGAATCTAACTTCATCAACAACCGTGGTGGCGGCGGTGGTGGTTTCATCTTCCGAACGGTGAACAATGAGAACACTGTAGAGACTGGAAGGGTGACTTTCACCGGAGGTGGTCAGGTTCACGCCAACCACTTCCAAGCCGCCAACGGTGCCCGAATTGAGGCGAACAACAACATCGTTGGTCAGAACCTCTACGCAGGAATGGGCAACGCGGCACTTGGCCCGGATGGGAACCTTAGCGGTGGCGTATGGAGTGGAGTAGGTGGCTCTTTATGGTCTTGCTTGAATGACCGATACCAGTTCGCCAAGCCTCCTGCTGGGGTTAGACTGTACACCGCCCGTGGTGGAGACTACCTAGAGGGTAACGTTGATGGTAAATCAGTTGGTTTCCGCTGGTTCCTGTCTGACAGAAGGCTTAAAGAGAACCTCAAGGTTGTTCGCTCTGCTGATGATATGCTCAATATTATCCGCTCATATATTCCGGTTTCCTACAAATATAAGGACTCTGAGTACGTTGACAGCCGTGGGAAGACTGTTACTATCACTGGTAAGAACTCTCGTGCTGGTTTCATTACTCAGGACTTGATTCGAATCTGGCCAGAAGCGGTTGACGTAATGTCAGATGGGATGCAGTCTCCAGACCCTAACCAGATTATTGGCGGACTGATGCTGCTTGTTAAGAACCTAGATGAACGTGTTCAGGCGCTTGAATCGAAGAGCACGACAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8ee939a6df6372f10d295c8764d141df6a6f373bec3f765fe6f3bd4bf0160b18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6412
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50