Protein

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Genbank accession
ANY29414.1 [GenBank]
Protein name
glycerophosphoryl diester phosphodiesterase
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MEDFDYTPLSSMRFQAQLGSEVKRMYKEGESVVRLSLARVTKVNYKYNTVEVMTTLHKNSTSKNPSDNGRYSARLPVVFGGRTPQGKVYGSNTIVTIGSLVLIGFLEGNKDHPIVLNIYGDADNQSMLTRTTMTGGDESDEAVQRELWQLFTLYPSMTYQNIDGRGNKEVTFSGKSFMYITDTDPGNEYVQDGAFDYADLPSSRYANGELIEPISPNSPTVLYVHQGIYDNHRVTFFLKSDGTLRVGSRHRNGKGITYQEMKTDGSFSIVQKQDTTNPEEISKKFSKFEISENGDVTIQSPDHKLTITKDGVLIDGKPIGSGGGGGDLEIIKDLQEKVEGVTTQITMVNGKLDFKIDKVEIEIDLDTLRQEQQKVLDAIRAQLDSLSSALKAMKDYTLPAFEDGTVTADEKKKVNELLTAVGREKAKVDEKYSQTISDPFLPATHKDLLTVSKGVLDSRHQALLNTIEIVMLDGVITPDERIAVAQAFDGYEQAIAALDVSFKQAMDAILEARIKEAQENAMKYRDTEMRKIGSQITQLADSITAKVSSEQLSKQIEEVRSEMATKEEQKEIKDTAEKAQKDAEEALKKVPHRIMVGSTNGLIFRNGEIDSILYAKVYKGDDEVTSTIPTANFFWSRISDDESGDLQWNKDHVGVGSSFKISKDDVPQRATFECDVEVPSS
Physico‐chemical
properties
protein length:681 AA
molecular weight: 75719,09920 Da
isoelectric point:5,02817
aromaticity:0,07048
hydropathy:-0,52056

Domains

Domains [InterPro]
DC_0209
STR
11–680
DC_0209
SSF69255
ATT
65–117
SSF69255 Coil Coil Coil
ANY29414.1
1 681
Architecture
STR
ATT
STR
STR 11-64 | ATT 65-117 | STR 118-680 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ANY29414.1
1 681
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,6587
Central domain 142 611 471 0,1702
C-terminal 612 681 69 0,1041
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-611
C-terminal
612-681

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage PK16
[NCBI] 		1873894 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus cereus
[NCBI] 		1396 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANY29414.1 [NCBI]
Genbank nucleotide accession
KX495186.1 [NCBI]
CDS location
range 129739 -> 131784
strand -
CDS
GTGGAAGATTTTGACTACACACCACTGTCCTCTATGAGGTTTCAGGCTCAACTAGGATCAGAAGTTAAACGTATGTACAAGGAGGGAGAGAGTGTTGTTAGGCTCTCCCTTGCTAGGGTTACAAAGGTTAACTACAAGTACAATACAGTGGAAGTTATGACAACACTACATAAAAACTCAACATCAAAGAATCCAAGTGACAACGGACGATACTCTGCTAGACTACCAGTTGTATTCGGTGGACGTACTCCGCAAGGTAAAGTATACGGTTCTAACACAATTGTTACAATCGGATCGTTAGTGTTAATCGGATTCTTAGAAGGTAATAAAGACCACCCTATTGTTTTAAACATCTATGGTGATGCAGATAACCAATCAATGTTAACACGTACAACAATGACAGGTGGGGACGAATCAGACGAAGCAGTTCAACGTGAGCTATGGCAGTTATTCACTCTATACCCTTCTATGACATATCAAAATATTGATGGTCGAGGAAATAAGGAAGTAACTTTCTCAGGTAAATCATTTATGTATATTACAGACACTGACCCTGGGAATGAATACGTGCAGGACGGAGCTTTCGACTACGCAGATTTACCGAGTTCTCGTTATGCAAATGGAGAACTAATCGAACCTATATCTCCGAACTCTCCTACAGTATTATACGTCCACCAAGGTATCTATGACAATCATAGAGTTACCTTCTTCCTTAAATCGGACGGAACGTTACGTGTAGGTAGCAGACATAGAAATGGTAAAGGGATTACATACCAAGAAATGAAAACAGACGGATCGTTCTCTATCGTGCAGAAGCAGGATACTACGAACCCTGAAGAGATTTCTAAAAAGTTCTCTAAGTTTGAAATTTCTGAAAATGGTGATGTTACAATCCAATCCCCTGACCACAAGTTAACTATCACAAAAGATGGTGTTCTGATTGATGGTAAACCAATCGGTTCAGGTGGTGGGGGAGGAGACCTTGAGATTATCAAGGACTTGCAAGAAAAGGTAGAAGGTGTAACCACACAGATAACAATGGTTAACGGTAAGCTAGATTTCAAGATTGATAAAGTTGAAATAGAGATAGACTTGGATACGCTTCGACAGGAGCAACAAAAAGTATTAGATGCTATCCGAGCACAACTGGACAGTTTATCTAGCGCACTGAAAGCTATGAAAGATTACACGTTACCTGCATTTGAGGATGGTACGGTTACGGCAGATGAAAAGAAAAAAGTTAACGAACTTCTAACTGCCGTAGGAAGAGAGAAAGCAAAGGTAGACGAGAAGTATAGCCAAACTATCTCCGATCCGTTCCTACCAGCCACACACAAAGATTTATTAACAGTATCGAAGGGTGTACTAGACAGTAGACATCAAGCGTTACTGAACACAATAGAAATCGTTATGTTAGACGGAGTTATAACTCCTGACGAACGTATAGCAGTAGCACAGGCATTCGATGGGTACGAGCAAGCTATTGCGGCTTTAGACGTATCCTTTAAACAGGCAATGGACGCAATCCTTGAAGCCCGTATTAAAGAAGCACAAGAGAATGCTATGAAATACAGAGATACAGAGATGCGTAAAATCGGTTCACAGATTACGCAACTAGCAGACTCTATCACGGCAAAGGTTAGTTCAGAACAACTATCGAAACAAATAGAAGAGGTTCGTTCTGAAATGGCTACAAAAGAAGAACAGAAAGAAATCAAGGACACTGCCGAGAAAGCACAAAAGGATGCAGAAGAAGCCTTGAAGAAGGTACCTCATCGTATCATGGTCGGTAGTACAAATGGTCTTATCTTTAGAAACGGTGAGATAGATAGTATCCTGTACGCTAAGGTGTACAAAGGAGATGACGAGGTTACATCGACTATACCTACGGCTAACTTCTTTTGGTCACGTATTTCGGACGATGAGAGTGGAGACTTACAGTGGAATAAAGACCACGTAGGTGTAGGAAGTTCATTCAAGATTTCGAAAGATGACGTACCACAGAGAGCAACGTTTGAATGTGATGTAGAGGTGCCTAGCAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4abc1990979d4824e51b361e021d58594fcdaed7c81fe1120d9d4d53cebb9428
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7000
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50