Protein

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Genbank accession
QDB71397.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGGKNHADLGNFEDIYPYGVCFDVFIQPLTDIDGDPIPYSENNWVFLKRIFIREKSENAKQFRIEIENLKYGRYYVKLKPFSTAPDSTSDTIKLDCSGEDAVYSTSANINGNIVRLKGEFSGQPTNKMMRDSINYDEFKRIVSSESGAPLRITTISEVVNPDNISKPSNYAGVAIVGVRVKASDRVSTAPEMSFFVSEGRKIRNLLHYGVQQATTTQSTIIDTSIDYSTINEIVNGTTKVRNLDTKLEGTVTGISNNRPTTTISFSPKDRFIIYNYEASNYFPDIYVDWLINPEGGLGAVIDGDNDIDYDSIVKARRFVKENEFYWDGVLSEVENFSAKVTKDASLSLLYPFSPNGLFGLTTEDENRLPIAVFNASNILKDSFEESVLPWQESQINQVVVVFTDGTDNQKPLTAVVARTDALVAKQVKLNSITIEAPSISNPEQARKVAGITLNSKRYQDKIVKFKTATQGLFLAPGEAILVQHTATEYDYDISGYVTEVGVYDLTTQTQRILLSRQPSNLISSDYKATIQLQETNTVLENLTFSLVQENGFIYLDIENLSSPISLYDPVVIGRAVIEDKVYRIQNLAISENGEISISAVLWSNKLFDFSDLDFQFQ
Physico‐chemical
properties
protein length:617 AA
molecular weight: 68991,52870 Da
isoelectric point:4,74187
aromaticity:0,10049
hydropathy:-0,26353

Domains

Domains [InterPro]
DC_1657
STR
217–515
DC_1657
IPR032876
ATT
382–492
IPR032876
QDB71397.1
1 617
Architecture
STR
ATT
STR
STR 217-381 | ATT 382-492 | STR 493-515 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Microcystis phage Mic1
[NCBI] 		2587456 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cyanobacteria
[NCBI] 		1117 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB71397.1 [NCBI]
Genbank nucleotide accession
MN013189.1 [NCBI]
CDS location
range 30178 -> 32031
strand -
CDS
ATGGGTGGTAAAAATCACGCAGATTTAGGAAATTTTGAAGATATTTATCCTTATGGGGTATGTTTTGATGTTTTTATACAACCCTTGACCGATATTGATGGTGACCCTATTCCTTATTCTGAAAACAATTGGGTTTTTCTTAAACGGATATTTATTCGTGAAAAATCTGAAAACGCTAAACAATTTAGAATAGAGATAGAAAATCTTAAATATGGACGATATTATGTCAAATTAAAACCTTTTTCAACGGCTCCTGATTCTACTTCAGATACTATAAAATTAGATTGTAGTGGTGAAGATGCTGTTTATTCAACTTCAGCCAATATTAACGGAAATATTGTGCGTTTAAAGGGGGAATTTTCAGGACAACCAACTAATAAAATGATGAGAGACTCTATAAATTATGATGAGTTCAAAAGAATAGTCTCATCTGAAAGTGGCGCACCACTTAGAATAACTACTATATCAGAAGTTGTAAATCCTGATAATATTTCAAAGCCTAGTAACTATGCTGGTGTGGCTATTGTTGGAGTTAGAGTGAAAGCTTCTGACAGAGTTTCAACAGCCCCTGAAATGTCTTTTTTTGTTAGTGAAGGAAGAAAAATTAGAAACTTATTACATTATGGAGTACAACAAGCAACTACTACTCAAAGCACTATTATTGACACATCTATCGATTATTCTACAATCAACGAAATAGTGAATGGGACAACTAAAGTTAGAAATCTAGACACTAAATTGGAAGGTACAGTGACAGGTATATCTAATAATAGACCTACTACGACTATATCTTTTAGCCCTAAAGACCGTTTTATTATCTATAATTATGAGGCATCTAATTATTTTCCCGATATTTATGTTGATTGGTTAATTAACCCAGAAGGTGGGTTAGGGGCAGTTATTGATGGCGATAATGATATTGATTATGATTCTATTGTTAAAGCCCGTAGATTCGTTAAAGAAAATGAATTTTATTGGGATGGTGTTTTATCAGAGGTGGAAAATTTTTCGGCTAAAGTAACAAAAGATGCTAGTCTTTCTCTCTTATACCCCTTTAGTCCTAATGGTTTATTTGGACTCACTACTGAAGATGAAAATAGATTGCCAATCGCAGTTTTCAATGCTTCCAACATTTTAAAAGATTCGTTTGAAGAAAGTGTATTACCGTGGCAAGAATCACAAATTAATCAAGTTGTTGTGGTCTTTACAGATGGTACTGATAATCAAAAACCTTTAACGGCAGTAGTAGCTAGAACTGATGCGTTAGTAGCTAAACAAGTTAAATTAAATTCTATCACAATTGAAGCTCCTAGCATTTCTAATCCTGAACAAGCCAGAAAGGTAGCTGGTATAACTCTTAACTCAAAGAGGTATCAAGATAAAATAGTCAAGTTTAAGACTGCTACTCAAGGACTTTTTTTAGCACCGGGTGAAGCAATTTTAGTTCAGCATACGGCTACCGAATATGATTATGACATTTCTGGATATGTTACCGAAGTTGGAGTCTATGATTTAACAACTCAAACCCAAAGAATTTTGTTATCTAGACAACCTTCTAATTTAATCTCATCTGACTATAAAGCTACTATTCAACTTCAGGAAACCAATACGGTACTAGAGAACTTAACTTTTTCATTAGTTCAGGAGAATGGCTTTATATATTTGGACATTGAAAATTTATCATCACCCATTTCCTTGTATGACCCTGTAGTTATTGGTAGAGCCGTTATTGAAGATAAAGTTTACAGGATTCAAAATCTTGCAATTTCTGAAAATGGTGAAATATCAATAAGTGCTGTTTTATGGTCTAACAAATTATTTGATTTTTCTGACCTCGACTTTCAATTTCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f53f39a783e357e202947cfebf8de409fc3e83926c71c7d22cdacf155b3aace
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7072
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of the freshwater cyanosiphophage Mic1 reveals an ancestor of mitochondrial DNA polymerase gamma Yang,F., Jin,H., Wang,X.Q., Zhang,J., Jiang,Y.L., Cui,N., Chen,Y.X., Li,W.F. and Zhou,C.Z. 2020-04-08 — GenBank