Protein

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Genbank accession
XLZ23567.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MVDIVKQDMTYLWAISGDVVAPDNAKIQEGWAVEVVPRQWWNWMQYRADSNIAYMLQKGIPEWDATTEYLANKSFVSSGGVVYKCLITNTNMAPLTNPTRWARAFQAYTAASNALGALTPAADRLPYFNGTGTAALTTLTSFARTLLDDTTNTAARTTLGAQASHANLTALSGVTAAVNTFPYWTSTTAMAAAPITAFARTLLDDADATAARATLGLGTAATQNTTTSTTDSTVGSLLRVGDWGGFGSVTGMAMPNTNCDDIVYTGVYNIVGSTANGPAGFTSGSTLLHLAWNTGAYHQIAINYVNGTQMAFRRRHSTNGWSAWSFVSTSADLQAALAGIGLNVNAAPNLTDLDLVTVTGFNRFTNSALNRPLSGASGTVMTTFYGTTYATQLAITVQTTDANLYNRTFTRTMNQGTWGVWKEQAVTEAPTINNATLTGTTTVPGGSVLKVGTTYTDVTSAALYVNNGFNNGTNGITIESFAPSISFIDRTTSSTASRWKMDGSHLRFETSVDNGVTWGINFNRASFGQTGNLGVSGALAQANVGLDVGVQTAGSTNITGTTQIGVRSHFNGGPDATAAVQGFVSENSVGDGTTTATTTTLVDFQANTQTVNPNHTVTSAMCFRANDKTSTRIQTAYGFWSSMATRAGVSRWSIYSSGNAPSYINGQTIVGGTTTLPAANVMLQVNGDQVVSGTLTAGTVTATNINATNFSVTGAFTPTNITTGDINATNVSMTNNLYAGNVITSAGGVFYSKAANSSSNSHLWFQDFSGNTTGIVYAQPNGTLTLQAANAVVANFSPTGAASFNAINGNSLNVNGGVTNTANSGQNTVQITSVKAGVPVSAGMYNYCGFQSQTTDGTPPGYGFHRAGDYALALYLSGGNQLQMMDSGGTNRELVNNANLGLWIVNNHPPSGGGVGSFAFCRSNGTATFGMDVAGSTLQYGSTGASGGSLGGTWRSLGWAGGGNHTLFIRVA
Physico‐chemical
properties
protein length:972 AA
molecular weight: 101132,54190 Da
isoelectric point:6,25868
aromaticity:0,09156
hydropathy:-0,06996

Domains

Domains [InterPro]
DC_0043
STR
1–161
DC_0043 DC_1290 cd19958 DC_1924
DC_0678
STR
326–500
DC_0678
XLZ23567.1
1 972
Architecture
STR
STR
RBD
STR 1-161 | STR 183-500 | RBD 765-972
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLZ23567.1
1 972
Domain Start End Length (AA) Confidence
N-terminal 1 519 519 0,2852
Central domain 520 731 213 0,7703
C-terminal 732 972 240 0,9075
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-519
Central
520-731
C-terminal
732-972

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage XD2
[NCBI] 		3348352 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLZ23567.1 [NCBI]
Genbank nucleotide accession
PQ288046.1 [NCBI]
CDS location
range 10479 -> 13397
strand +
CDS
ATGGTCGATATCGTAAAACAGGATATGACATACCTTTGGGCTATCAGCGGTGACGTTGTTGCACCTGATAACGCAAAGATTCAAGAAGGTTGGGCGGTTGAAGTTGTTCCACGCCAGTGGTGGAACTGGATGCAATACCGTGCTGACTCCAACATTGCCTACATGCTTCAAAAAGGTATCCCTGAATGGGACGCCACAACTGAATACCTTGCCAACAAGTCGTTCGTGAGTTCTGGCGGTGTCGTCTATAAGTGCTTGATCACCAACACTAACATGGCACCTCTGACAAACCCAACTCGCTGGGCAAGAGCTTTCCAAGCCTACACAGCCGCTTCTAACGCACTTGGTGCTTTGACTCCTGCTGCTGACCGTCTTCCATACTTCAATGGTACTGGGACCGCTGCTCTTACAACCCTGACAAGCTTTGCCCGTACATTGCTTGATGATACAACAAACACCGCTGCTCGTACAACACTTGGTGCACAGGCATCCCATGCCAACTTGACTGCGTTGTCTGGTGTAACTGCTGCCGTTAACACATTCCCATACTGGACAAGCACAACAGCAATGGCTGCGGCCCCAATCACAGCCTTCGCCCGTACTTTGCTTGACGACGCTGATGCCACAGCCGCTCGTGCCACACTTGGACTTGGGACAGCTGCTACACAGAACACAACAACAAGCACAACCGACTCGACAGTCGGAAGTTTGCTCCGTGTTGGTGACTGGGGTGGGTTCGGTTCTGTCACTGGTATGGCTATGCCAAACACCAACTGTGACGACATTGTTTACACTGGTGTCTACAACATTGTAGGCTCTACAGCAAACGGCCCTGCTGGCTTCACATCTGGTTCGACACTGTTGCACTTGGCTTGGAACACTGGTGCTTACCACCAGATTGCAATCAACTACGTGAACGGTACTCAGATGGCCTTCCGTCGTCGTCACTCGACAAACGGATGGTCTGCTTGGAGCTTCGTATCTACTTCTGCTGATTTGCAAGCCGCTTTGGCTGGCATTGGTTTGAACGTAAACGCTGCACCAAACCTGACAGACCTTGACCTCGTTACAGTTACAGGATTCAACCGATTCACTAACTCTGCTTTGAACAGGCCACTCTCTGGTGCATCTGGTACAGTGATGACTACCTTCTACGGTACGACATACGCTACCCAGTTGGCAATCACTGTTCAGACAACAGACGCAAATCTGTACAACCGCACATTCACACGTACTATGAACCAAGGTACATGGGGTGTTTGGAAAGAGCAAGCTGTAACAGAGGCTCCAACAATCAACAACGCAACTCTGACAGGTACAACAACTGTTCCCGGTGGCAGTGTTCTGAAAGTTGGTACAACATACACAGACGTAACAAGTGCTGCTCTGTATGTCAACAACGGATTCAACAACGGTACAAACGGAATCACGATTGAGAGCTTTGCTCCTTCAATCTCATTCATCGACAGAACAACAAGCTCCACAGCTTCTCGCTGGAAGATGGATGGAAGCCACCTCCGCTTTGAAACCTCTGTGGACAATGGTGTAACTTGGGGTATCAACTTCAACCGAGCTTCGTTCGGTCAGACTGGTAACTTGGGTGTATCTGGTGCTCTTGCACAGGCGAACGTAGGTTTGGATGTTGGTGTTCAGACTGCTGGTAGCACAAACATCACTGGTACAACACAGATTGGTGTCCGTTCTCACTTCAACGGTGGTCCTGACGCTACCGCTGCTGTTCAAGGCTTCGTATCTGAGAACTCTGTGGGTGACGGTACAACAACTGCAACCACAACCACGTTGGTAGATTTCCAAGCCAACACTCAGACAGTCAACCCAAACCACACTGTAACAAGTGCTATGTGCTTCCGTGCAAACGACAAAACGTCTACACGAATTCAGACAGCCTACGGGTTCTGGTCAAGCATGGCAACTCGTGCAGGTGTAAGCCGTTGGAGTATTTATTCTTCTGGTAATGCCCCAAGCTACATCAACGGACAAACAATTGTCGGAGGAACTACAACACTTCCTGCTGCTAACGTCATGCTGCAAGTGAACGGTGACCAAGTTGTTTCTGGTACACTAACTGCTGGCACTGTAACAGCTACTAACATCAACGCTACAAACTTCTCTGTTACTGGTGCGTTTACACCAACAAACATCACAACTGGTGATATCAACGCCACAAACGTTAGTATGACCAACAACCTGTACGCAGGTAACGTGATCACTTCTGCTGGTGGTGTGTTCTACTCCAAAGCTGCAAACTCGTCTTCGAACTCTCACCTGTGGTTCCAAGACTTCTCTGGCAACACAACTGGTATCGTATACGCACAACCAAACGGAACACTGACACTGCAAGCTGCTAACGCTGTTGTTGCAAACTTCTCCCCTACGGGTGCTGCAAGTTTCAACGCAATCAACGGAAATTCGTTGAACGTCAATGGTGGTGTTACAAACACTGCAAACAGTGGACAGAACACAGTACAGATCACAAGCGTCAAAGCTGGTGTTCCTGTTTCTGCTGGCATGTACAACTACTGCGGATTCCAGTCTCAAACAACAGACGGAACTCCACCGGGTTACGGATTCCACCGAGCTGGTGACTATGCTCTTGCACTATACCTGAGCGGTGGCAACCAACTTCAAATGATGGACTCCGGTGGTACTAACCGTGAACTTGTAAACAACGCCAACCTTGGTTTGTGGATTGTAAACAACCATCCGCCAAGCGGTGGTGGTGTTGGTAGCTTCGCGTTCTGCCGTTCTAACGGCACAGCCACATTCGGTATGGACGTTGCAGGATCGACTCTCCAGTACGGCTCTACAGGTGCTTCTGGTGGCAGCCTCGGTGGTACATGGCGTAGCCTTGGATGGGCTGGTGGTGGAAACCACACATTGTTCATCCGTGTAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5d0b11b37e34e0ba06d2593458b6a49d96b9862f6a590710f070a5b7410b1fd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6115
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50