Protein

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Genbank accession
AVR55741.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MLKILDICIWNGKTWYDLGKSFDASKFVDITSDQVAINGIKKFTGKLKALTPVDSDDVAILSWTTKQINDKVESVIGDLNSLNNEVSKDNLVNAINSVDDKFKTTAKTNKSNTFTGDQTYVDHILLESVPSERNHAVNLGYILDNPGGIKLPDHTALTQNSVTEITFGYANPVSYSAQQLKNVFLKDIVGNEYKAIMADKTSFTENPSKEMVVILSRTDYTKNIDVKFDITKTVDELKQYELKEGEVRVILSYDTVSVYSSGYGYGAMFARNANKKDGDLIYDYYTGSQNDITNNRKVSIKIDKLGINTPDIVSISMTTNGSEKLTVKTDTLDPVENTYESADMTYIHTPVSKTVGDVLYSNISQAIKSIHLLENNICSLKPADMELQLVRLKEFKQTINNMLQSMFDESPVALENGDYINVSFSGSASYRTGYCGYVNIKDTIRDITYKAYKVSSNAFNTTSGTKVIAVLTSDNSKTNVTYSDSVSTLESYEVAENEILLEISFSTAKQYSAKYGYGAMLEYWGSVSDLCYDYYMGSNLDMNCPFKITILKLGSSVKADTIQIGAPTTFAGSLVMHLRKNTNDVINFLVSTGVNVTGRDGTESGSVYNLVEKSLKPLKVLTSEAHQSINGITTFNNKVYMNINNEKITDSKQLIHKEYLDKNIADNVAYNISNTPLVPYNDVSSLNTKNICVKISATTDSSNYSSGDTVVVSNFKIKLKGDNEYLKPYGVEVIDRENNKIGLNLIGDDTVYNDNDALLSTRPSDFNSSSVDLSSGSNALVTVKTNGAYDYSGVYDIPNPFREYNKKYSLFLSNDGLKNPYYQVDINSSKQVDNISFQLFGTSATNPFLYSKDCKIELFIENTIVKTFNIKGSSGNNSPVNINIDYKDGMFLISVLDSINYINNRINKNAELLTGSGKPNFSLNPNKIGSLYSDTTNKAVYMCIDNTSGANKWVNIVTGDEIKPNLRKIEITCNVRLRSGQYGGCMSGVKIGFDNGYASTKQIVKGLNSGQILLSLDGLGNLSGYSEVSSLTPSSQDIKVDVDTTGIYNDPSYHCVTNIFKEYLGNADQCSLWSDASVKQLKITLLSEKIPNKILYVGDGYYGQTSVSDVKAIWYYVNDNGDKIEGSIDNDLEISNNDSETNDSSYIYAFNIN
Physico‐chemical
properties
protein length:1153 AA
molecular weight: 127470,19590 Da
isoelectric point:5,03340
aromaticity:0,09280
hydropathy:-0,34579

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVR55741.1
1 1153
Domain Start End Length (AA) Confidence
N-terminal 1 250 250 0,6823
Central domain 251 548 299 0,5308
C-terminal 549 1153 604 0,1471
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-250
Central
251-548
C-terminal
549-1153

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CP39
[NCBI] 		2136799 No lineage information
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVR55741.1 [NCBI]
Genbank nucleotide accession
MH107028.1 [NCBI]
CDS location
range 59379 -> 62840
strand -
CDS
ATGCTGAAGATACTGGATATATGTATATGGAATGGTAAAACTTGGTATGATTTAGGTAAATCTTTTGATGCTAGTAAATTTGTTGATATAACTTCAGACCAAGTAGCAATAAATGGTATTAAAAAATTCACAGGAAAATTAAAAGCATTAACACCTGTTGATTCTGATGATGTGGCTATTTTGAGCTGGACAACAAAACAAATAAATGACAAAGTTGAATCTGTTATTGGTGATTTAAATTCATTAAATAATGAAGTTTCTAAAGATAATTTAGTTAATGCTATAAATAGTGTAGATGATAAGTTTAAAACAACAGCTAAAACCAATAAATCAAATACATTTACAGGTGATCAAACTTATGTAGACCATATTTTACTAGAATCTGTTCCTTCTGAAAGAAATCATGCAGTTAATTTGGGATACATTTTAGATAATCCTGGAGGTATAAAACTTCCTGATCATACAGCACTTACACAAAATTCTGTTACAGAAATAACTTTTGGATATGCAAATCCAGTATCATATTCTGCACAACAATTAAAAAATGTATTCCTAAAAGATATAGTAGGTAATGAATATAAAGCTATAATGGCAGATAAAACATCATTTACAGAAAATCCTTCAAAGGAAATGGTTGTTATACTTTCTAGAACTGATTATACAAAAAATATAGATGTTAAGTTTGATATAACTAAAACAGTTGATGAGCTTAAACAATATGAGCTTAAAGAAGGAGAAGTTAGAGTTATACTATCTTATGATACTGTATCTGTTTATTCTAGTGGGTATGGTTATGGAGCTATGTTTGCTAGAAACGCTAATAAAAAAGACGGAGACTTAATATATGATTATTATACTGGAAGTCAAAATGATATAACAAATAATAGAAAAGTATCTATAAAAATAGATAAACTTGGTATTAATACTCCAGATATTGTAAGTATATCTATGACTACAAATGGTTCTGAAAAATTAACAGTAAAAACAGATACACTAGATCCTGTAGAAAATACATACGAATCTGCGGATATGACTTATATCCATACTCCTGTCAGCAAAACTGTAGGAGATGTTTTGTATAGTAATATATCTCAAGCAATCAAATCAATACATTTATTAGAAAATAATATATGCTCTTTAAAGCCTGCAGATATGGAATTACAACTTGTAAGACTTAAAGAATTTAAACAAACAATAAATAATATGTTGCAATCTATGTTTGATGAGAGTCCTGTAGCACTAGAAAATGGAGATTACATAAATGTTTCATTTAGTGGTAGTGCAAGTTATAGAACAGGATATTGTGGGTATGTTAATATAAAAGATACTATAAGAGATATTACATATAAAGCTTATAAAGTATCTTCAAATGCTTTTAATACAACTAGTGGAACTAAAGTTATTGCAGTTCTCACTTCTGATAACAGTAAAACAAATGTAACTTATTCCGATAGTGTATCAACATTAGAATCTTATGAAGTAGCAGAAAATGAGATATTATTAGAAATATCATTTTCAACTGCTAAGCAATATTCTGCTAAATACGGATATGGAGCTATGTTAGAGTATTGGGGTTCTGTATCTGATTTATGTTATGATTACTATATGGGTTCAAACCTAGATATGAACTGTCCATTTAAAATAACAATACTAAAACTAGGAAGTTCTGTTAAAGCTGATACTATACAAATAGGTGCTCCTACTACTTTTGCAGGATCATTAGTTATGCACCTAAGAAAAAATACAAACGATGTTATTAATTTCCTTGTATCTACAGGTGTGAATGTAACAGGAAGAGATGGGACTGAAAGTGGATCAGTATATAATTTAGTAGAAAAATCATTGAAACCATTAAAAGTTCTAACATCTGAAGCACATCAATCTATAAATGGTATAACTACTTTTAATAATAAAGTGTATATGAATATAAACAATGAAAAAATTACAGACAGCAAACAACTAATACATAAAGAATACCTAGATAAAAATATTGCAGACAATGTAGCATATAATATTAGTAATACTCCATTAGTACCTTACAATGATGTTAGTTCTTTAAATACAAAAAATATTTGTGTAAAAATATCTGCGACAACTGATAGCTCTAATTATTCATCTGGTGATACAGTAGTAGTTAGTAATTTCAAGATAAAACTTAAAGGAGATAATGAGTACCTTAAACCTTATGGGGTTGAAGTTATTGATAGAGAAAACAATAAAATAGGTTTAAATTTAATAGGAGATGATACAGTATATAATGATAATGATGCTTTATTATCTACAAGACCTTCTGATTTTAATTCATCTAGTGTAGATCTTTCTAGTGGAAGTAACGCCTTAGTAACTGTTAAAACTAATGGAGCTTATGATTATAGTGGAGTTTATGATATACCAAATCCTTTTAGAGAATATAATAAAAAATACTCTTTATTCTTAAGTAATGATGGGTTAAAAAATCCTTATTACCAAGTTGATATAAATAGCTCCAAACAAGTTGATAATATATCTTTTCAATTATTTGGAACTAGTGCTACAAATCCTTTTTTATATTCTAAAGACTGTAAAATTGAATTGTTTATAGAAAATACTATTGTAAAAACCTTCAATATTAAAGGCAGCTCTGGAAATAATAGTCCTGTGAATATTAATATAGATTATAAAGATGGTATGTTTTTAATATCTGTTCTTGATTCTATAAATTACATAAATAATAGAATTAATAAAAATGCAGAATTACTTACAGGGTCAGGCAAACCTAATTTTTCATTAAACCCTAACAAAATAGGTTCTCTATACTCTGATACAACTAATAAAGCTGTATATATGTGTATAGACAATACTTCTGGTGCTAATAAATGGGTAAATATAGTAACAGGAGATGAAATTAAACCAAACCTTAGAAAAATAGAAATTACTTGTAATGTAAGATTAAGAAGTGGCCAATATGGTGGTTGTATGAGCGGTGTTAAAATAGGATTTGATAACGGATATGCTTCTACAAAACAAATAGTTAAAGGGTTAAATAGTGGTCAAATATTGCTATCTCTAGATGGGTTGGGTAACCTTTCTGGATATTCTGAAGTCAGTTCTTTAACTCCTAGCAGTCAAGATATAAAAGTTGATGTGGATACTACTGGGATATATAATGACCCTTCATATCATTGCGTTACTAATATATTTAAAGAATACCTTGGCAATGCTGATCAATGTTCGCTATGGTCTGATGCTAGTGTTAAACAACTTAAAATAACTTTATTATCTGAAAAGATTCCTAATAAAATATTGTATGTAGGAGACGGATATTATGGTCAAACATCTGTTTCTGATGTAAAAGCTATATGGTATTATGTAAATGATAATGGAGACAAAATAGAAGGTAGTATAGATAATGATTTGGAAATAAGCAATAATGACTCTGAAACAAACGATAGTTCTTATATATATGCGTTCAATATAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
942dcb4f35b76372f9d11184789f3e14573ea23bf12dd6422bc3511ec3656595
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4871
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, identification, CP39 whole genome analysis and application of Campylobacter jejuni 11168 phage Song,Z., Huang,J., Tong,Y. and Zhao,F. 2022-02-26 — GenBank