Protein

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Genbank accession
QDB70318.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MAKEKKEKAKALDNVLASVEADMTVEVVENEDNYCPGDDTLTSFDVQFQTKEGVRVHKEYQKPNGEPKVTIAGKEIQLTKTDDCPDSPYSFYRHDIQGDKSRGFYKYESLEQFTKLCAERKYRWWTAIVNGVKLFVTEGSILTLDTITEQYYDEQDPVPASLYLTASSLVGGHLYVSKTNKIVNGDFEFENCTMEGCDVKHSRLDGKYLNMSKSTVIRSVVKSGNVTLINAQVYDSHLGVSGYISLENKAELRKVNITDGYARSNASKLLITVPVSDFSIDVKTEDKVVQITHRAHYGYIQGIDRTPFVKLGLDFTNFLGMMIAGTIISREEALTNSRPFLMTDTDKMEQLCTRLFNQDLAPSYRRDDWVERKVPFPFTIKSQIDNIRSQIASKMELWDLIETVKGS
Physico‐chemical
properties
protein length:407 AA
molecular weight: 46180,75300 Da
isoelectric point:5,55882
aromaticity:0,09337
hydropathy:-0,44545

Domains

Domains [InterPro]
DC_0897
STR
1–403
DC_0897
Coil
Unmapped
2–22
Coil
QDB70318.1
1 407
Architecture
STR
STR 1-403 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDB70318.1
1 407
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,0619
Central domain 155 353 200 0,1702
C-terminal 354 407 53 0,9847
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-353
C-terminal
354-407

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage CF8
[NCBI] 		2575324 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB70318.1 [NCBI]
Genbank nucleotide accession
MK774614 [NCBI]
CDS location
range 155195 -> 156418
strand +
CDS
ATGGCTAAAGAAAAGAAAGAGAAAGCTAAAGCACTGGATAATGTCTTGGCTTCTGTTGAAGCGGACATGACAGTAGAGGTTGTTGAGAACGAAGATAATTATTGTCCTGGTGATGATACGCTGACCTCGTTTGATGTCCAGTTTCAAACCAAAGAAGGGGTTCGGGTTCATAAAGAGTATCAAAAGCCTAACGGTGAACCCAAGGTGACCATTGCTGGAAAAGAAATCCAGTTGACCAAAACAGATGACTGTCCAGATAGTCCTTATAGTTTTTATCGCCATGATATCCAAGGCGATAAAAGCCGAGGGTTTTATAAATACGAGTCACTGGAGCAATTCACTAAACTCTGTGCTGAACGCAAATACCGTTGGTGGACAGCAATTGTTAATGGAGTCAAACTGTTTGTGACAGAAGGCTCTATCCTAACTCTTGATACGATCACTGAACAGTATTACGACGAACAAGATCCTGTTCCAGCCAGTCTTTATTTGACCGCCTCTTCTTTGGTAGGTGGACACCTTTATGTTTCTAAAACAAACAAGATTGTCAACGGTGACTTTGAGTTTGAAAACTGTACAATGGAAGGATGCGATGTAAAACATTCCCGTCTTGATGGGAAGTATTTGAATATGTCAAAGTCCACTGTTATCCGCTCTGTGGTAAAAAGCGGGAACGTTACACTTATTAATGCACAGGTGTACGATAGCCATTTGGGAGTGAGTGGGTACATTAGTCTGGAAAATAAAGCGGAACTGCGTAAAGTTAACATTACCGATGGTTACGCTCGAAGTAATGCATCCAAACTGTTGATTACTGTTCCTGTCAGTGATTTTAGTATTGATGTTAAAACCGAAGACAAAGTTGTTCAGATCACCCACCGTGCTCATTACGGGTATATCCAAGGGATTGACAGAACCCCGTTCGTTAAACTGGGATTGGATTTTACCAATTTCCTTGGTATGATGATCGCCGGAACTATTATCAGCCGGGAAGAAGCACTGACTAATTCTCGCCCATTCCTTATGACCGATACAGATAAGATGGAGCAGCTTTGTACCCGGTTGTTTAACCAGGATCTTGCACCTTCTTACCGACGTGATGATTGGGTAGAACGTAAAGTTCCCTTCCCGTTCACTATTAAATCTCAAATCGACAATATCCGTTCTCAGATTGCATCTAAGATGGAGTTGTGGGATTTGATTGAGACTGTTAAAGGCAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e64adbd87a7b30cfc47fc474c07b56c5e34d10842f5123af94dddef62f7e6e9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4297
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila bacteriophage CF8 Rai,S., Tyagi,A., Naveenkumar,B.T. and Singh,N.K. 2020-04-30 — GenBank