Protein

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UniProt accession

A0A8S5V1E1 [UniProt]

Protein name

YadA-like protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MNNKILLTGLVLASLASTTMAAGVGNTLDPNATGYGAEAYGKSNTITATGTSAFAVGFENNVSGANSFAYGHKNTVTGANSFAGGENSEAKGYSSVAIGSSAQALSDYTFAIGSQARTNGDNTVAIGNGAYASNSNALAVGAGTIAEGRDSIAVGSYVQSHSDNNVAIGTSVTTNSNNSVGIGNNVVNNLSNSIGIGNGVATDFNTIGIGNGVETKVQDTIAIGNGVVSNGESSVAIGNGIHAKGVKTVNIGTNVNAKGVSSIVVGHDTTVNGDDTTVVGAKNGTIDADQVAVYGYNNVVQDASKEQLIFGVNSTTKEQGSTVVGSHSKATAIDSLALGNNTIADVQNGVAIGTNSVTESPVGTTNIKDNTTDIRFSNSTYAGSNPDSVVSFGTNGRAGAGGVTEYTRQLQNLAAGRVSATSTDGINGSQLYDVALEAQKHNTLVDGTNTKVTSQDNAFGRKEYKVNVNRDLTNMNSVQFNTVNDSQRNFVSKDGMHVFNGEVNTNYGSNGIKLENTDNLDTAEYNMDGININSNGKNVRFGTDGINAGDQIINNVKAGVADTDAVNVSQLKGVQSNVANNTSRINNLGQKVNTNANDIRAVEHTILDHEGRITVLENGVKDLDNKINSTAGNVLNQSKSYTDNQAAKVGANAAALSALHPLDFNADEKWQFSVGFGNYKGKNATALGAFYQPNENVLLSIGTTLGTGENMINAGATVRFGSHSSMTTNKQVAVAKEVQDLKLQLSAISQKYDNLVKNLSAQKAGQDVDFEYSDLPKDHWAYDFVKKLSDKGYLNGYPDDTFKGDAKMTRYEFAAALWRAVNNGAIIDAQMTKAIKEFEPELEEVNKIMRYRIDTVAGKDNSVHKTERLRVNKNDDPFTHMKRDNYGTKTYTNK

Physico‐chemical properties

protein length:	894 AA
molecular weight:	93827,56770 Da
isoelectric point:	5,49686
aromaticity:	0,06152
hydropathy:	-0,41163

Domains

Domains [InterPro]

IPR011049
STR
12–102

IPR011049 IPR011049 IPR011049 IPR011049 IPR011049 G3DSA:3.30.1300.30 Coil IPR001119

cd12820
STR
19–148

cd12820 IPR011049 IPR011049 IPR005594 IPR001119

IPR008640
Unmapped
48–71

IPR008640 IPR011049 IPR008640 IPR008640 IPR008635 IPR011049 IPR051465

IPR008640
Unmapped
90–116

IPR008640 IPR008640 cd12820 IPR008635 IPR001119

IPR008640
Unmapped
219–240

IPR008640 IPR045584

A0A8S5V1E1

1 894

Architecture

STR

RBD

ATT

RBD

STR 12-604 | RBD 605-664 | ATT 665-720 | RBD 768-831 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011049	STR	IPR011049	12	102	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
cd12820	STR	DC_0258	19	148	InterPro cluster	cd12820	Central	Low	Positional only	46 proteins / 51 hits
IPR008640	Unmapped	-	48	71	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR011049	STR	IPR011049	88	225	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008640	Unmapped	-	90	116	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR011049	STR	IPR011049	103	201	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008640	Unmapped	-	132	156	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR011049	STR	IPR011049	202	304	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR011049	STR	IPR011049	217	434	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
cd12820	STR	DC_0258	219	360	InterPro cluster	cd12820	Central	Low	Positional only	46 proteins / 51 hits
IPR008640	Unmapped	-	219	240	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR008640	Unmapped	-	257	281	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR011049	STR	IPR011049	305	466	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008640	Unmapped	-	330	356	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR008635	RBD	DC_0221	409	450	InterPro cluster	Trimeric autotransporter adhesin YadA-like, stalk domain	C-terminal	Medium	Text match	14 proteins / 17 hits
IPR011049	STR	IPR011049	442	574	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR011049	STR	IPR011049	473	604	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR011049	STR	IPR011049	480	604	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008635	RBD	DC_0221	553	593	InterPro cluster	Trimeric autotransporter adhesin YadA-like, stalk domain	C-terminal	Medium	Text match	14 proteins / 17 hits
IPR045584	RBD	IPR045584	563	720	Merged direct domain	Pilin-like	C-terminal	Low	Positional only	5 proteins / 5 hits
G3DSA:3.30.1300.30	RBD	G3DSA:3.30.1300.30	605	720	Merged direct domain	G3DSA:3.30.1300.30	C-terminal	Low	Positional only	62 proteins / 62 hits
IPR005594	ATT	DC_0200	665	718	InterPro cluster	Trimeric autotransporter adhesin YadA-like, C-terminal membrane anchor domain	C-terminal	Medium	Text match	43 proteins / 43 hits
Coil	Unmapped	-	738	758	Coils	Coil	-	-	-	-
IPR001119	RBD	DC_0591	768	831	InterPro cluster	S-layer homology domain	C-terminal	Low	Positional only	3 proteins / 3 hits
IPR001119	RBD	DC_0591	770	820	InterPro cluster	S-layer homology domain	C-terminal	Low	Positional only	3 proteins / 3 hits
IPR051465	Unmapped	-	772	844	InterPro	Cell Envelope Structural Component	-	-	-	-
IPR001119	RBD	DC_0591	772	814	InterPro cluster	S-layer homology domain	C-terminal	Low	Positional only	3 proteins / 3 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

A0A8S5V1E1

1 894

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	28	28	0,3190
Central domain	29	678	651	0,5989
C-terminal	679	894	215	0,0458

Note: Constraints were applied during segmentation.
Fixed 18 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-28

Central
29-678

C-terminal
679-894

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Myoviridae sp. ctJ2i1 [NCBI]	2825079	Uroviricota > Caudoviricetes >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

DAG00508.1 [NCBI]

Genbank nucleotide accession

BK016182 [NCBI]

CDS location

range 76455 -> 79139
strand +

CDS

ATGAATAACAAAATTTTATTGACAGGTTTAGTATTAGCGTCTTTAGCAAGTACAACTATGGCGGCAGGTGTTGGTAACACTCTAGATCCAAATGCAACAGGATACGGTGCTGAAGCTTATGGTAAAAGCAACACTATTACTGCAACAGGCACATCAGCATTTGCTGTTGGTTTTGAAAATAATGTAAGTGGTGCTAACTCATTTGCCTATGGCCATAAAAATACAGTAACCGGTGCAAACAGCTTCGCTGGTGGTGAAAATTCCGAAGCAAAGGGTTATAGCAGTGTAGCTATTGGTTCTTCTGCACAAGCATTATCAGATTATACCTTTGCCATCGGTAGCCAAGCACGTACTAATGGCGATAACACAGTAGCTATTGGCAATGGGGCATATGCAAGTAATAGTAACGCATTGGCTGTTGGTGCTGGTACTATAGCAGAGGGTAGAGATTCCATTGCTGTTGGTTCATATGTTCAATCTCATTCTGATAACAATGTAGCTATTGGTACTTCTGTTACTACTAATAGTAATAATAGTGTTGGTATTGGTAACAATGTTGTTAATAACCTTAGCAATAGTATTGGTATCGGTAACGGAGTTGCTACTGACTTTAATACTATTGGTATTGGCAATGGTGTCGAAACTAAGGTTCAAGACACTATTGCTATTGGTAACGGAGTCGTATCCAATGGCGAATCTTCAGTAGCCATTGGTAATGGTATCCATGCAAAAGGCGTCAAAACTGTAAACATTGGTACAAATGTAAATGCAAAAGGCGTATCTTCTATTGTTGTTGGTCATGATACAACTGTAAATGGCGATGATACTACAGTAGTAGGAGCAAAAAATGGTACTATTGACGCAGATCAAGTTGCAGTTTATGGCTACAATAATGTAGTTCAAGATGCATCTAAAGAACAGTTAATCTTTGGTGTGAATAGTACTACAAAAGAGCAAGGCTCTACTGTAGTTGGTTCTCATTCTAAAGCTACAGCTATTGATAGCTTGGCATTAGGCAATAACACTATTGCTGACGTTCAAAATGGCGTCGCAATTGGTACTAACTCTGTAACTGAAAGTCCTGTTGGTACAACTAATATCAAAGATAACACAACAGATATTCGCTTCAGCAATTCTACATATGCTGGTAGCAATCCTGACTCTGTTGTAAGCTTTGGTACAAATGGTCGTGCTGGCGCTGGTGGTGTAACAGAATACACACGTCAATTGCAAAACTTAGCAGCTGGTCGAGTATCTGCTACATCCACTGATGGCATTAATGGCTCCCAACTATACGACGTTGCGTTAGAAGCGCAAAAACACAATACTCTTGTAGATGGAACTAATACAAAAGTTACATCTCAAGATAACGCTTTTGGGCGTAAAGAATACAAAGTTAACGTTAACCGTGATTTGACTAATATGAACTCTGTTCAATTTAATACAGTTAACGATTCACAACGTAACTTTGTATCCAAAGATGGCATGCATGTATTCAATGGTGAAGTAAATACAAACTATGGTTCCAATGGTATCAAACTTGAGAATACTGATAACTTAGATACTGCAGAATATAATATGGATGGTATCAATATTAATTCTAACGGCAAAAACGTTCGTTTCGGTACTGACGGTATCAACGCTGGCGATCAAATCATCAACAATGTAAAAGCTGGTGTAGCTGATACTGATGCAGTTAACGTATCTCAATTAAAAGGTGTTCAAAGTAATGTAGCAAATAACACTAGTCGTATTAATAATTTAGGCCAAAAAGTAAATACAAACGCTAACGATATTCGTGCAGTTGAACATACAATTCTTGATCATGAAGGTAGAATTACTGTTTTAGAAAACGGTGTTAAAGATTTAGATAATAAAATTAATTCTACTGCTGGTAATGTATTAAATCAATCTAAATCTTATACCGATAATCAAGCTGCTAAAGTTGGTGCTAATGCTGCTGCTTTAAGTGCATTGCATCCATTAGATTTTAATGCCGATGAAAAATGGCAATTTAGTGTTGGCTTCGGTAACTATAAAGGTAAAAATGCTACTGCTTTAGGTGCTTTCTACCAACCTAACGAAAATGTATTGTTAAGTATTGGTACTACTTTAGGTACTGGTGAAAATATGATTAATGCTGGTGCAACTGTTCGTTTCGGTTCTCATAGCTCTATGACTACTAATAAACAAGTAGCTGTCGCTAAAGAAGTTCAGGATCTTAAATTGCAACTAAGTGCTATTTCTCAAAAATATGACAACTTAGTTAAAAATCTTTCTGCTCAAAAAGCAGGTCAAGATGTAGACTTCGAATATAGCGATCTTCCTAAAGATCATTGGGCATATGATTTCGTTAAGAAATTATCTGATAAAGGTTATTTGAATGGCTATCCAGATGACACATTCAAAGGCGACGCTAAAATGACTCGCTATGAATTTGCTGCTGCTCTTTGGAGAGCTGTAAATAACGGTGCTATTATTGATGCTCAAATGACTAAAGCTATTAAAGAATTTGAACCAGAACTTGAAGAAGTAAATAAAATTATGCGTTATCGTATCGATACTGTAGCTGGTAAAGATAATTCTGTTCATAAAACAGAACGTTTACGTGTGAATAAAAACGATGATCCATTCACTCATATGAAACGTGATAACTACGGTACTAAAACTTACACTAATAAATAA

Genome Context

Gene Ontology

	Description	Category	Evidence (source)
GO:0019867	outer membrane	Cellular Component	IEA:InterPro (UniProt)
GO:0015031	protein transport	Biological Process	IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID

8f092602c692188ea264a4c77dd40e7b39c4f776eacf40d7135746aeeda4147d

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,8145

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence