Protein

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Genbank accession
YP_010644338.1 [GenBank]
Protein name
minor head protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MRSLSKNIWIMSNFEVLLTTLTGDRDAGGCRYWNGSFEEPLSPGETATYQFTADASHPNSKYVINDNKVIFKEPEEFGGEYRMFTIIDTELGRSEQDGRYIIATCEPAWYELDDDFIENIRPTDKTPQEALDLILAGTRYVGEVDPDLQMRASDSFYQVSAKEAVIQFFQTWGGYFKDTIEFDGNDITRRVIKSLKRRGAANGVRFEHDKDITGIRRNITGYPKTALYPYGASLEMTDEDGNATGGYTRYIDIKDVVWSKAAGDPVDKPAGQAWVGDPDLLKVFGRPMDDGSLRHRWTRWQNEDIKTPEELIEAAYYDLVNNVSKAIVNYNVEVAPKNVKLGDTCIVLDREFATPIELEADVIKMTYFTDRPEEGATIELGEYLDLDDIEKQIGAINDRFKKNEGKWNTGGGITEVTDGDFPDTKPPKPSNIVVKAMFQSVFISWDYNPASYIAGYRVYASKVKDFTPTDNDIIFEGKMSGYEHKVGNNELWYYRLSAVNYHETESDLSDQYSAQSVRIMTDDILFGSVIADKLANLAVTADKLSRNFDEGNIFPGSLLKQKQFYDYTNSSHTVEEKTFNEMTIKQVALGSQVFFGVCGEVRAPNKINRMPMVQGEVYTLSFEIKRNNTTDINYIHLRDDGGTSTTWTRISGAAQADISSYPSDQFVRVDIQFTAPATSSNCTIGIAGNNKNSATELCSFVIRKVQVRKGTEIKDYGYSPYDIMLTDGAIYGEYIQAASINSAHIAEAAIGSAAIQNAAIKNAHLGTAIVDTANIKDAAITSAKIKELSADLITSGTINAINITGSLIRGGRFEPLNESSAYTSYIEGDKIYQRVNTVNYGGTPEKTYSDLTITSGDITLAYGGRDTGTDEPLRTLRLRDGSIYMSGNINDAGYAEQQMFCNDDNILNAPKAIYRQRLGGVNRMILHSYYDSIPKSYNVQMDTRNSGVYSHFADMWQLTSDGGIMIMSKNGRGIHLDPCNDGTAGQLTLNVGNAGESGSGLIKPVMAGEPHYSITDIHGALQTNMVVMLYQQNFYMPSTGDAYASVYSDISPPFQTENIFMVVPTVFGSYSDHVHATITSQSSTGFRCYIRGTGSSTAILGRTFPVRFVIYYEVI
Physico‐chemical
properties
protein length:1115 AA
molecular weight: 123865,90400 Da
isoelectric point:4,89153
aromaticity:0,10404
hydropathy:-0,38574

Domains

Domains [InterPro]
DC_1274
ATT
5–807
DC_1274
IPR007119
Unmapped
81–367
IPR007119 IPR013783
IPR010572
ENZ
109–382
IPR010572
YP_010644338.1
1 1115
Architecture
ATT
ATT 5-807 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010644338.1
1 1115
Domain Start End Length (AA) Confidence
N-terminal 1 621 621 0,8037
Central domain 622 820 200 0,3678
C-terminal 821 1115 294 0,5768
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-621
Central
622-820
C-terminal
821-1115

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage 000TH010
[NCBI] 		2601652 Uroviricota > Caudoviricetes > Trautnerviridae > Rivavirus > Rivavirus rv000TH010
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010644338.1 [NCBI]
Genbank nucleotide accession
NC_070624 [NCBI]
CDS location
range 16449 -> 19796
strand +
CDS
GTGAGAAGCTTGTCAAAAAATATTTGGATAATGAGCAACTTTGAAGTGCTTTTGACCACTCTGACGGGAGATAGGGACGCAGGAGGTTGCAGGTATTGGAATGGTTCATTTGAAGAGCCGTTATCGCCCGGAGAAACAGCGACGTATCAGTTTACCGCCGATGCAAGTCACCCGAATAGTAAGTATGTGATAAATGACAATAAAGTCATATTCAAAGAGCCGGAAGAATTCGGCGGAGAATACAGGATGTTCACCATCATAGATACTGAGTTAGGAAGGTCTGAACAAGATGGCAGATACATTATCGCCACCTGTGAACCTGCTTGGTACGAGTTGGACGATGACTTCATAGAAAATATCAGACCTACCGACAAAACGCCACAAGAGGCCTTAGATTTGATTTTAGCGGGTACCCGTTACGTCGGTGAAGTTGATCCAGATTTGCAAATGAGGGCATCGGATAGCTTTTATCAAGTGTCTGCGAAAGAGGCTGTCATTCAGTTTTTCCAAACATGGGGCGGCTACTTCAAAGATACTATCGAATTCGACGGGAATGACATAACAAGACGGGTTATAAAATCCTTAAAAAGACGAGGCGCCGCTAACGGCGTCCGTTTTGAACATGACAAGGATATAACGGGTATCCGCAGAAACATTACCGGGTATCCCAAAACAGCGTTGTACCCATACGGAGCTAGCCTTGAAATGACAGACGAGGACGGAAACGCCACGGGCGGTTACACACGTTACATAGACATCAAAGATGTTGTCTGGAGCAAAGCCGCTGGCGACCCCGTGGACAAGCCAGCTGGACAAGCTTGGGTAGGTGACCCGGATTTGCTCAAAGTATTTGGACGCCCAATGGATGATGGATCTCTCCGCCACAGATGGACGCGCTGGCAAAACGAGGACATCAAGACGCCAGAAGAGTTGATTGAGGCGGCTTACTATGACTTGGTAAACAACGTTTCAAAAGCAATCGTCAACTATAACGTTGAGGTTGCGCCTAAAAACGTAAAGTTGGGAGATACTTGTATAGTCCTAGATCGGGAGTTTGCTACACCGATAGAATTAGAAGCTGATGTCATCAAGATGACTTATTTCACAGACAGGCCAGAGGAAGGCGCGACAATCGAGCTTGGTGAATATCTTGATCTGGACGATATTGAAAAGCAGATTGGGGCCATAAATGACCGTTTCAAGAAGAATGAGGGGAAATGGAACACAGGTGGAGGCATCACGGAAGTTACTGACGGAGATTTTCCGGATACTAAGCCGCCAAAACCCTCGAATATAGTTGTCAAAGCTATGTTTCAGAGTGTTTTTATATCGTGGGACTACAATCCGGCCAGTTATATTGCAGGTTACAGGGTTTACGCTTCGAAAGTTAAAGACTTCACACCTACTGATAACGATATCATCTTTGAAGGTAAAATGAGTGGTTACGAACACAAAGTAGGTAATAACGAATTGTGGTATTACCGTTTATCTGCTGTTAACTACCACGAGACAGAAAGTGACCTTTCCGACCAATATAGCGCCCAGTCTGTCCGAATTATGACTGACGACATTCTTTTTGGTTCGGTCATAGCTGACAAGTTGGCAAACTTGGCTGTCACGGCGGACAAGCTCTCTAGAAACTTTGATGAAGGAAACATTTTCCCGGGTTCATTATTAAAACAAAAGCAGTTTTATGATTACACTAACTCTTCCCATACCGTTGAAGAAAAAACTTTCAACGAAATGACAATTAAACAAGTGGCGTTAGGATCACAAGTGTTTTTTGGTGTCTGTGGAGAGGTGAGAGCACCTAATAAAATCAATCGAATGCCGATGGTGCAAGGTGAAGTTTACACACTATCTTTCGAGATAAAGAGAAACAACACAACGGATATAAATTACATCCATTTAAGGGACGATGGCGGAACCTCGACCACCTGGACTAGAATAAGCGGTGCCGCACAAGCTGACATATCTAGTTATCCGTCAGATCAATTCGTGAGGGTGGACATCCAGTTTACAGCCCCAGCGACTTCATCGAATTGCACAATCGGAATTGCTGGGAATAACAAAAACAGCGCCACTGAGCTGTGCTCTTTTGTTATTCGGAAAGTTCAAGTGAGGAAAGGAACAGAAATAAAAGACTATGGTTACAGTCCTTATGACATCATGCTCACGGACGGGGCTATCTATGGGGAGTATATACAAGCCGCGTCAATAAATAGCGCCCATATCGCAGAAGCGGCCATTGGTTCAGCGGCCATTCAGAACGCGGCCATCAAAAACGCCCATCTTGGTACAGCTATTGTTGACACCGCGAATATCAAAGATGCGGCCATCACAAGCGCAAAAATCAAAGAACTGTCAGCCGATTTGATTACGTCCGGGACAATAAACGCAATTAATATCACGGGTTCATTGATTCGTGGTGGACGTTTCGAGCCGTTGAATGAATCGTCTGCTTATACCTCTTATATCGAGGGGGATAAGATTTATCAGCGTGTCAACACTGTCAACTATGGCGGGACGCCGGAAAAAACGTATAGCGATTTAACAATTACGAGTGGTGATATCACACTAGCCTACGGAGGGCGAGACACTGGAACAGACGAGCCTTTAAGAACTTTAAGGTTGAGAGACGGTTCAATTTATATGTCTGGAAATATTAATGATGCGGGATATGCAGAGCAACAAATGTTTTGCAATGATGATAACATTTTAAATGCACCTAAAGCTATTTACAGACAAAGATTAGGCGGAGTAAATAGAATGATTTTGCATTCATATTACGACAGCATACCTAAATCATATAATGTGCAAATGGATACGAGAAATTCTGGTGTGTATTCTCATTTTGCCGACATGTGGCAATTAACATCGGACGGCGGAATAATGATCATGTCTAAAAACGGAAGGGGAATACATTTAGACCCATGCAACGATGGAACTGCCGGGCAATTGACTTTAAATGTCGGGAATGCTGGCGAAAGTGGAAGTGGACTTATAAAACCTGTCATGGCAGGGGAGCCGCACTACTCTATAACTGACATACACGGTGCCTTGCAAACGAATATGGTTGTCATGTTATACCAGCAAAATTTTTATATGCCAAGCACTGGCGACGCTTATGCATCTGTATATAGTGATATTTCACCGCCTTTCCAAACTGAAAATATTTTCATGGTTGTGCCGACAGTTTTCGGGAGTTACTCTGATCATGTTCATGCAACTATAACATCGCAATCGTCAACCGGGTTCCGTTGTTACATTAGGGGAACAGGTAGTTCTACAGCTATTCTCGGGCGTACTTTCCCGGTCAGATTTGTAATTTATTATGAAGTGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
42cbdc47fb6a7ca51e78cf57edda8067ebb620ada113516c9e8b1174776632ce
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2687
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50