Protein
View in Explore- Genbank accession
- CAB4136182.1 [GenBank]
- Protein name
- Head domain of trimeric autotransporter adhesin
- RBP type
-
TSPTFTF
- Protein sequence
-
MSIDLGNTPVGTPPTTPEQAQIRSAIGLGSVNNTADSAKPVSTAQQTALNLKADLASPTFTGTVSGITAAMVGLGSVNNTADSAKPVSTAQQTALNLKADQSSLGSLATLAIPGNTTTYLRGDGTWVAVSGSVNLASPGPIGNTVPSTIAATDLVVNGNTNWTIGCTFTYGDSTASAAHRTALGLGTLATVSPTGTADATTYLRGDGSWATVTGSGGFVGTAKRIIIGGSGTNADGSIENTLATTGTSATVNNAILAVPSAVGTTNVNLVLSPKGTGALIGGPAPDGLATGGGNARGAGALDLQTSRTTATQVASNLSSIALGSSCTASGPTSIVIGVGSSASGTNSISIGNGCTNTGSNFVAGRGDTAASSSSCNRGGVALVGGTSTSGYNNIAIGDTSVANSQYGAVALGNNLKATGNSSIALGSGSYSDRSGMVAYAYSQMSAQGDNQWVNFVLRGQTLLTTSAAELLIDTLPSVPLTIPPGKTMAFTVHVVGTKVGGNDGCYFIRKGIIKNIATTTSLVGPVVEETVYAGTGGTATCVVDAVDSTVDYLRIRVATPWTAAETWNWTAYVLGIERNHA
- Physico‐chemical
properties -
protein length: 581 AA molecular weight: 57423,03930 Da isoelectric point: 5,63930 aromaticity: 0,04475 hydropathy: 0,11497
Domains
Domains [InterPro]
DC_1239
RBD
6–130
RBD
6–130
IPR011049
STR
311–439
STR
311–439
IPR011049
STR
311–430
STR
311–430
1
581
Architecture
RBD 6-130 | STR 284-443 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
581
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 285 | 285 | 0,3812 |
| Central domain | 286 | 484 | 200 | 0,6377 |
| C-terminal | 485 | 581 | 96 | 0,9994 |
Note: Constraints were applied during segmentation.
Fixed 163 C-terminal predictions appearing before Central domain
Fixed 163 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-285
1-285
Central
286-484
286-484
C-terminal
485-581
485-581
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
uncultured Caudovirales phage [NCBI] |
2100421 | Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch > |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAB4136182.1
[NCBI]
Genbank nucleotide accession
LR796314
[NCBI]
CDS location
range 16553 -> 18298
strand -
strand -
CDS
ATGAGCATTGATTTAGGCAATACACCTGTTGGAACGCCACCAACGACACCCGAACAAGCCCAGATCAGATCGGCAATCGGCCTGGGAAGTGTCAACAACACAGCGGATAGCGCCAAGCCGGTGTCCACCGCGCAGCAAACGGCACTGAACCTGAAGGCCGATCTGGCATCGCCCACCTTTACCGGCACCGTCAGCGGCATCACCGCCGCCATGGTTGGCCTGGGAAGCGTCAACAACACAGCGGATAGCGCCAAGCCAGTCTCCACTGCGCAGCAAACGGCACTGAATCTGAAGGCCGATCAATCTTCGCTTGGGTCACTTGCTACGTTAGCGATTCCTGGAAATACAACAACTTACCTCCGTGGCGATGGGACTTGGGTTGCGGTTAGTGGCTCGGTAAATCTTGCCTCCCCTGGACCAATTGGAAACACTGTACCATCAACAATTGCAGCGACCGATTTAGTGGTAAACGGTAATACAAATTGGACAATTGGGTGTACATTTACCTACGGCGACTCCACCGCCTCCGCCGCCCACCGCACCGCCCTTGGCCTCGGCACCCTCGCCACCGTATCGCCCACAGGCACCGCAGATGCCACCACCTATTTGCGCGGAGATGGCAGCTGGGCCACCGTGACTGGGAGCGGAGGATTCGTCGGCACCGCCAAACGGATCATCATTGGCGGCAGCGGGACTAATGCTGATGGCTCAATCGAAAATACGCTAGCGACAACAGGTACGTCAGCGACCGTCAATAACGCCATCCTCGCAGTCCCCTCCGCCGTCGGGACTACCAACGTCAATCTAGTACTATCGCCCAAAGGGACGGGCGCACTTATTGGAGGCCCGGCACCAGACGGATTAGCTACTGGAGGCGGAAACGCAAGAGGCGCCGGGGCTCTTGATTTACAAACATCTAGAACGACTGCCACGCAAGTAGCTAGCAATTTAAGCTCAATAGCTTTAGGCTCATCCTGCACAGCATCTGGCCCAACGAGCATAGTCATTGGAGTAGGTTCTTCAGCATCAGGAACAAATAGCATATCTATTGGAAATGGTTGTACAAATACAGGAAGTAATTTTGTAGCAGGGCGAGGCGATACTGCGGCTTCCTCTTCATCTTGTAATAGAGGCGGCGTTGCACTAGTTGGCGGAACGTCGACTTCTGGTTACAATAATATAGCAATTGGAGATACATCCGTAGCTAATTCGCAATATGGGGCTGTAGCCCTTGGAAATAACTTAAAAGCGACTGGCAACTCGTCAATTGCACTTGGAAGTGGTTCTTATTCTGACAGATCTGGGATGGTTGCATATGCCTATTCTCAGATGTCGGCGCAAGGTGACAACCAATGGGTCAATTTTGTATTGCGCGGACAAACACTGCTAACTACATCAGCCGCCGAATTGCTTATTGATACCTTGCCGAGCGTTCCATTGACAATCCCTCCAGGGAAAACAATGGCATTTACAGTCCATGTTGTAGGAACCAAAGTCGGTGGCAATGATGGATGTTATTTTATTCGGAAGGGGATTATTAAAAACATCGCAACAACAACTTCTTTAGTTGGGCCAGTAGTTGAGGAAACGGTATACGCGGGAACAGGTGGGACCGCCACCTGTGTTGTGGATGCAGTAGATTCCACGGTAGATTATTTACGCATCAGAGTAGCAACCCCATGGACTGCCGCAGAAACATGGAACTGGACTGCTTACGTTTTAGGCATTGAACGCAACCACGCATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
e1f2218838cf8ac9ba15c308d5120653c08c23d0aa89471b1d2f43d650a318ee
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50